contig_metadata
26 rows where analysis = "blastn", bioproject = "PRJNA1188114" and tax_phylum = "Ciliophora"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320108 | 320108 | PRJNA1188114_P_NODE_4861_length_207_cov_1.936709_g4809_i0 | PRJNA1188114 | 4861 | 207 | 1.936709 | 4.00898763 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 311 | 2.71e-80 | NTclustered | gi|829192616|ref|XM_001029813.3| | 312017 | g4809 | i0 | 94.527 | 0.971014492753623 | 201 | 11 | 97 | 0 | 1 | 201 | 259 | 459 | Tetrahymena thermophila SB210 60S ribosomal protein L15 partial mRNA | blastn | 201 | 311 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 1042122 | 1042122 | PRJNA1188114_P_NODE_6941_length_188_cov_1.100719_g6889_i0 | PRJNA1188114 | 6941 | 188 | 1.100719 | 2.06935172 | Tetrahymena | 5890 | SAR_Eukaryotes | SAR_Eukaryotes | 342 | 8.539999999999999e-90 | NTclustered | gi|148362050|gb|EF428128.1| | 5912 | g6889 | i0 | 100 | 99.9893617021277 | 185 | 0 | 98 | 0 | 2 | 186 | 762 | 578 | Tetrahymena tropicalis strain Lahorensis 18S ribosomal RNA gene, partial sequence | blastn | 18798 | 342 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena tropicalis | ||
| 2870757 | 2870757 | PRJNA1188114_P_NODE_14643_length_165_cov_0.879310_g14591_i0 | PRJNA1188114 | 14643 | 165 | 0.87931 | 1.4508615 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 250 | 4.5599999999999996e-62 | NTclustered | gi|118385632|ref|XM_001025944.1| | 312017 | g14591 | i0 | 93.939 | 1 | 165 | 10 | 100 | 0 | 1 | 165 | 121 | 285 | Tetrahymena thermophila SB210 receptor of activated kinase C 1A, component of 40S small ribosomal subunit partial mRNA | blastn | 165 | 250 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 4146845 | 4146845 | PRJNA1188114_P_NODE_10024_length_175_cov_1.396825_g9972_i0 | PRJNA1188114 | 10024 | 175 | 1.396825 | 2.44444375 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 172 | 1.08e-38 | NTclustered | gi|829185210|ref|XM_001032881.3| | 312017 | g9972 | i0 | 84.795 | 0.977142857142857 | 171 | 26 | 98 | 0 | 5 | 175 | 44 | 214 | Tetrahymena thermophila SB210 hypothetical protein partial mRNA | blastn | 171 | 172 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 4146886 | 4146886 | PRJNA1188114_P_NODE_15064_length_165_cov_0.879310_g15012_i0 | PRJNA1188114 | 15064 | 165 | 0.87931 | 1.4508615 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 204 | 3.5999999999999995e-48 | NTclustered | gi|829173636|ref|XM_001017148.3| | 312017 | g15012 | i0 | 89.091 | 1 | 165 | 16 | 99 | 2 | 1 | 164 | 240 | 403 | Tetrahymena thermophila SB210 hypothetical protein partial mRNA | blastn | 165 | 204 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 4146946 | 4146946 | PRJNA1188114_P_NODE_3564_length_232_cov_1.890710_g3512_i0 | PRJNA1188114 | 3564 | 232 | 1.89071 | 4.3864472 | Oxytricha sp. LPJ-2005 | 329142 | SAR_Eukaryotes | SAR_Eukaryotes | 174 | 4.24e-39 | NTclustered | gi|67462291|gb|DQ062087.1| | 329142 | g3512 | i0 | 84.884 | 62.8491379310345 | 172 | 26 | 74 | 0 | 42 | 213 | 316 | 487 | Oxytricha sp. LPJ-2005 heat shock protein 70 mRNA, partial cds; macronuclear | blastn | 14581 | 174 | 1 | Eukaryota | Sar | Ciliophora | Spirotrichea | Sporadotrichida | Oxytrichidae | Oxytricha | Oxytricha sp. LPJ-2005 | ||
| 7973213 | 7973213 | PRJNA1188114_P_NODE_1107_length_411_cov_2.640884_g1055_i0 | PRJNA1188114 | 1107 | 411 | 2.640884 | 10.85403324 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 394 | 5.7e-105 | NTclustered | gi|829197694|ref|XM_001029851.3| | 312017 | g1055 | i0 | 83.981 | 1.44282238442822 | 412 | 64 | 100 | 2 | 1 | 411 | 40 | 450 | Tetrahymena thermophila SB210 papain family cysteine protease partial mRNA | blastn | 593 | 394 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 7973263 | 7973263 | PRJNA1188114_P_NODE_15867_length_164_cov_0.886957_g15815_i0 | PRJNA1188114 | 15867 | 164 | 0.886957 | 1.45460948 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 204 | 3.5699999999999997e-48 | NTclustered | gi|829101093|ref|XM_001007665.3| | 312017 | g15815 | i0 | 90.789 | 0.926829268292683 | 152 | 14 | 93 | 0 | 13 | 164 | 668 | 517 | Tetrahymena thermophila SB210 AAA domain protein partial mRNA | blastn | 152 | 204 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 7973312 | 7973312 | PRJNA1188114_P_NODE_5307_length_200_cov_1.688742_g5255_i0 | PRJNA1188114 | 5307 | 200 | 1.688742 | 3.377484 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 250 | 5.7399999999999995e-62 | NTclustered | gi|146185323|ref|XM_001031586.2| | 312017 | g5255 | i0 | 94.969 | 1.125 | 159 | 8 | 80 | 0 | 42 | 200 | 1 | 159 | Tetrahymena thermophila SB210 40S ribosomal protein S13 partial mRNA | blastn | 225 | 250 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 7973336 | 7973336 | PRJNA1188114_P_NODE_7587_length_185_cov_1.500000_g7535_i0 | PRJNA1188114 | 7587 | 185 | 1.5 | 2.775 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 220 | 4.09e-53 | NTclustered | gi|829150968|ref|XM_001010768.3| | 312017 | g7535 | i0 | 88.827 | 22.6756756756757 | 179 | 20 | 97 | 0 | 7 | 185 | 275 | 97 | Tetrahymena thermophila SB210 peptidyl-prolyl cis-trans isomerase, cyclophilin-type protein partial mRNA | blastn | 4195 | 220 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 10523730 | 10523730 | PRJNA1188114_P_NODE_3449_length_235_cov_2.467742_g3397_i0 | PRJNA1188114 | 3449 | 235 | 2.467742 | 5.7991937 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 279 | 8.87e-71 | NTclustered | gi|829184873|ref|XM_001032358.3| | 312017 | g3397 | i0 | 88.186 | 1.00851063829787 | 237 | 24 | 100 | 3 | 1 | 235 | 469 | 235 | Tetrahymena thermophila SB210 60S acidic ribosomal protein P0 partial mRNA | blastn | 237 | 279 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 15622779 | 15622779 | PRJNA1188114_P_NODE_19833_length_161_cov_0.910714_g19781_i0 | PRJNA1188114 | 19833 | 161 | 0.910714 | 1.46624954 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 176 | 7.609999999999999e-40 | NTclustered | gi|229595147|ref|XM_001019547.3| | 312017 | g19781 | i0 | 86.42 | 1.00621118012422 | 162 | 20 | 100 | 2 | 1 | 161 | 506 | 346 | Tetrahymena thermophila SB210 papain family cysteine protease partial mRNA | blastn | 162 | 176 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 15622795 | 15622795 | PRJNA1188114_P_NODE_3293_length_241_cov_1.057292_g3241_i0 | PRJNA1188114 | 3293 | 241 | 1.057292 | 2.54807372 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 403 | 5.199999999999998e-108 | NTclustered | gi|829192616|ref|XM_001029813.3| | 312017 | g3241 | i0 | 97.071 | 8.54356846473029 | 239 | 7 | 99 | 0 | 3 | 241 | 283 | 45 | Tetrahymena thermophila SB210 60S ribosomal protein L15 partial mRNA | blastn | 2059 | 403 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 16897097 | 16897097 | PRJNA1188114_P_NODE_13934_length_166_cov_0.871795_g13882_i0 | PRJNA1188114 | 13934 | 166 | 0.871795 | 1.4471797 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 152 | 1.33e-32 | NTclustered | gi|829160366|ref|XM_012796660.1| | 312017 | g13882 | i0 | 83.133 | 1 | 166 | 28 | 100 | 0 | 1 | 166 | 77 | 242 | Tetrahymena thermophila SB210 tricarboxylate transporter partial mRNA | blastn | 166 | 152 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 16897122 | 16897122 | PRJNA1188114_P_NODE_1694_length_326_cov_3.353791_g1642_i0 | PRJNA1188114 | 1694 | 326 | 3.353791 | 10.93335866 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 453 | 7.190000000000001e-123 | NTclustered | gi|229594318|ref|XM_001030083.3| | 312017 | g1642 | i0 | 91.95 | 0.99079754601227 | 323 | 26 | 99 | 0 | 1 | 323 | 385 | 707 | Tetrahymena thermophila SB210 40S ribosomal protein S3 partial mRNA | blastn | 323 | 453 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 16897135 | 16897135 | PRJNA1188114_P_NODE_1874_length_312_cov_3.433460_g1822_i0 | PRJNA1188114 | 1874 | 312 | 3.43346 | 10.7123952 | Tetrahymena pyriformis | 5908 | SAR_Eukaryotes | SAR_Eukaryotes | 392 | 1.51e-104 | NTclustered | gi|10789|emb|X61053.1| | 5908 | g1822 | i0 | 96.996 | 120.416666666667 | 233 | 7 | 75 | 0 | 80 | 312 | 1334 | 1102 | T.pyriformis TU20 gene for ubiquitin | blastn | 37570 | 392 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena pyriformis | ||
| 18171626 | 18171626 | PRJNA1188114_P_NODE_3115_length_247_cov_1.030303_g3063_i0 | PRJNA1188114 | 3115 | 247 | 1.030303 | 2.54484841 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 230 | 9.61e-56 | NTclustered | gi|829100410|ref|XM_001007359.3| | 312017 | g3063 | i0 | 85.268 | 0.906882591093117 | 224 | 31 | 90 | 2 | 7 | 229 | 651 | 429 | Tetrahymena thermophila SB210 transmembrane protein, putative partial mRNA | blastn | 224 | 230 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 18171644 | 18171644 | PRJNA1188114_P_NODE_6115_length_191_cov_1.746479_g6063_i0 | PRJNA1188114 | 6115 | 191 | 1.746479 | 3.33577489 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 276 | 8.95e-70 | NTclustered | gi|829192652|ref|XM_001030092.3| | 312017 | g6063 | i0 | 92.67 | 2.77486910994764 | 191 | 14 | 100 | 0 | 1 | 191 | 367 | 177 | Tetrahymena thermophila SB210 40S ribosomal protein S8-2 partial mRNA | blastn | 530 | 276 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 18893584 | 18893584 | PRJNA1188114_P_NODE_2615_length_266_cov_0.940092_g2563_i0 | PRJNA1188114 | 2615 | 266 | 0.940092 | 2.50064472 | Tetrahymena | 5890 | SAR_Eukaryotes | SAR_Eukaryotes | 342 | 1.2899999999999999e-89 | NTclustered | gi|315570290|tpg|BK007907.1| | 5911 | g2563 | i0 | 89.925 | 2.01503759398496 | 268 | 24 | 99 | 3 | 1 | 265 | 634 | 367 | TPA_exp: Tetrahymena thermophila 40S ribosomal protein rpS1e mRNA, complete cds | blastn | 536 | 342 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 18893588 | 18893588 | PRJNA1188114_P_NODE_3195_length_244_cov_1.569231_g3143_i0 | PRJNA1188114 | 3195 | 244 | 1.569231 | 3.82892364 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 446 | 8.639999999999999e-121 | NTclustered | gi|1837628855|gb|MN158348.1| | 5909 | g3143 | i0 | 99.59 | 97.4754098360656 | 244 | 1 | 100 | 0 | 1 | 244 | 2903 | 2660 | Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 23784 | 446 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena rostrata | ||
| 19445974 | 19445974 | PRJNA1188114_P_NODE_11696_length_168_cov_1.714286_g11644_i0 | PRJNA1188114 | 11696 | 168 | 1.714286 | 2.88000048 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 189 | 1.0299999999999998e-43 | NTclustered | gi|829183394|ref|XM_001020966.3| | 312017 | g11644 | i0 | 87.273 | 0.982142857142857 | 165 | 21 | 98 | 0 | 4 | 168 | 449 | 285 | Tetrahymena thermophila SB210 transmembrane protein, putative partial mRNA | blastn | 165 | 189 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 19446048 | 19446048 | PRJNA1188114_P_NODE_3056_length_249_cov_1.470000_g3004_i0 | PRJNA1188114 | 3056 | 249 | 1.47 | 3.6603 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 206 | 1.6299999999999998e-48 | NTclustered | gi|829184530|ref|XM_001021598.3| | 312017 | g3004 | i0 | 81.818 | 1.01606425702811 | 253 | 38 | 100 | 4 | 1 | 249 | 336 | 88 | Tetrahymena thermophila SB210 60S ribosomal protein L34 partial mRNA | blastn | 253 | 206 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 21996756 | 21996756 | PRJNA1188114_P_NODE_6618_length_189_cov_1.314286_g6566_i0 | PRJNA1188114 | 6618 | 189 | 1.314286 | 2.48400054 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 237 | 4.17e-58 | NTclustered | gi|829186368|ref|XM_001022292.3| | 312017 | g6566 | i0 | 89.362 | 0.994708994708995 | 188 | 20 | 99 | 0 | 1 | 188 | 693 | 506 | Tetrahymena thermophila SB210 peptidase M16 inactive domain protein partial mRNA | blastn | 188 | 237 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 22718929 | 22718929 | PRJNA1188114_P_NODE_1558_length_342_cov_2.784983_g1506_i0 | PRJNA1188114 | 1558 | 342 | 2.784983 | 9.52464186 | Tetrahymena | 5890 | SAR_Eukaryotes | SAR_Eukaryotes | 333 | 1.03e-86 | NTclustered | gi|315570342|tpg|BK007933.1| | 5911 | g1506 | i0 | 86.084 | 1.80701754385965 | 309 | 43 | 90 | 0 | 1 | 309 | 7 | 315 | TPA_exp: Tetrahymena thermophila 40S ribosomal protein rpS26e mRNA, complete cds | blastn | 618 | 333 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 23272171 | 23272171 | PRJNA1188114_P_NODE_17079_length_163_cov_0.894737_g17027_i0 | PRJNA1188114 | 17079 | 163 | 0.894737 | 1.45842131 | Tetrahymena thermophila | 5911 | SAR_Eukaryotes | SAR_Eukaryotes | 252 | 1.25e-62 | NTclustered | gi|118385632|ref|XM_001025944.1| | 312017 | g17027 | i0 | 94.479 | 1 | 163 | 9 | 100 | 0 | 1 | 163 | 513 | 351 | Tetrahymena thermophila SB210 receptor of activated kinase C 1A, component of 40S small ribosomal subunit partial mRNA | blastn | 163 | 252 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila | ||
| 23994221 | 23994221 | PRJNA1188114_P_NODE_2299_length_282_cov_1.163090_g2247_i0 | PRJNA1188114 | 2299 | 282 | 1.16309 | 3.2799138 | Tetrahymena | 5890 | SAR_Eukaryotes | SAR_Eukaryotes | 472 | 1.6799999999999998e-128 | NTclustered | gi|315570294|tpg|BK007909.1| | 5911 | g2247 | i0 | 96.809 | 2 | 282 | 9 | 100 | 0 | 1 | 282 | 654 | 373 | TPA_exp: Tetrahymena thermophila 40S ribosomal protein rpS2e mRNA, complete cds | blastn | 564 | 472 | 1 | Eukaryota | Sar | Ciliophora | Oligohymenophorea | Hymenostomatida | Tetrahymenidae | Tetrahymena | Tetrahymena thermophila |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;