contig_metadata
53 rows where analysis = "blastn", bioproject = "PRJNA1186363" and tax_phylum = "Pseudomonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 319837 | 319837 | PRJNA1186363_P_NODE_30281_length_314_cov_1.601660_g29393_i0 | PRJNA1186363 | 30281 | 314 | 1.60166 | 5.0292124 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 580 | 3.0299999999999992e-161 | NTclustered | gi|1958308771|gb|CP068109.1| | 34062 | g29393 | i0 | 100 | 62.6082802547771 | 314 | 0 | 100 | 0 | 1 | 314 | 1592510 | 1592197 | Moraxella osloensis strain FDAARGOS_1130 chromosome, complete genome | blastn | 19659 | 580 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 319882 | 319882 | PRJNA1186363_P_NODE_40861_length_248_cov_0.891429_g39973_i0 | PRJNA1186363 | 40861 | 248 | 0.891429 | 2.21074392 | Candidatus Symbiodolus clandestinus | 3234017 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2724612512|gb|CP152425.1| | 3234017 | g39973 | i0 | 96.875 | 0.129032258064516 | 32 | 0 | 13 | 1 | 61 | 91 | 1338731 | 1338762 | MAG: Candidatus Symbiodolus clandestinus isolate Ogal chromosome, complete genome | blastn | 32 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Candidatus Symbiodolus | Candidatus Symbiodolus clandestinus | |||
| 1594327 | 1594327 | PRJNA1186363_P_NODE_16222_length_486_cov_1.653753_g15335_i0 | PRJNA1186363 | 16222 | 486 | 1.653753 | 8.03723958 | Xanthomonas arboricola | 56448 | Bacteria | Bacteria | 54.7 | 0.013 | NTclustered | gi|2130528182|emb|HG992336.1| | 56448 | g15335 | i0 | 100 | 0.0596707818930041 | 29 | 0 | 6 | 0 | 299 | 327 | 4748651 | 4748623 | Xanthomonas arboricola strain 1311a genome assembly, chromosome: XA1311A | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas arboricola | ||
| 1594463 | 1594463 | PRJNA1186363_P_NODE_34942_length_277_cov_2.470588_g34054_i0 | PRJNA1186363 | 34942 | 277 | 2.470588 | 6.84352876 | Pseudomonas kermanshahensis | 2745482 | Bacteria | Bacteria | 507 | 4.53e-139 | NTclustered | gi|2260437839|gb|CP099575.1| | 2745482 | g34054 | i0 | 99.639 | 641.032490974729 | 277 | 1 | 100 | 0 | 1 | 277 | 2891 | 3167 | Pseudomonas kermanshahensis strain F8 chromosome, complete genome | blastn | 177566 | 507 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas kermanshahensis | ||
| 2317316 | 2317316 | PRJNA1186363_P_NODE_20782_length_413_cov_1.317647_g19894_i0 | PRJNA1186363 | 20782 | 413 | 1.317647 | 5.44188211 | Dickeya | 204037 | Bacteria | Bacteria | 52.8 | 0.04 | NTclustered | gi|2864254841|gb|CP146228.1| | 1326752 | g19894 | i0 | 96.875 | 0.309927360774818 | 32 | 0 | 8 | 1 | 231 | 262 | 1221679 | 1221649 | Dickeya sp. CFBP 1272 chromosome, complete genome | blastn | 128 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Pectobacteriaceae | Dickeya | Dickeya sp. CFBP 1272 | ||
| 4146592 | 4146592 | PRJNA1186363_P_NODE_23344_length_381_cov_1.629870_g22456_i0 | PRJNA1186363 | 23344 | 381 | 1.62987 | 6.2098047 | uncultured Gammaproteobacteria bacterium | 86473 | Bacteria | Bacteria | 627 | 4.7499999999999997e-175 | NTclustered | gi|2874253898|emb|OY970073.1| | 86473 | g22456 | i0 | 96.335 | 185.622047244094 | 382 | 12 | 100 | 2 | 1 | 381 | 3255687 | 3255307 | MAG: uncultured Gammaproteobacteria bacterium isolate MFD05513.bin.2.20 genome assembly, chromosome: 1 | blastn | 70722 | 627 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | uncultured Gammaproteobacteria bacterium | |||||
| 4146718 | 4146718 | PRJNA1186363_P_NODE_42724_length_244_cov_0.912281_g41836_i0 | PRJNA1186363 | 42724 | 244 | 0.912281 | 2.22596564 | Bartonella grahamii | 33045 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|240266805|gb|CP001562.1| | 634504 | g41836 | i0 | 100 | 0.122950819672131 | 30 | 0 | 12 | 0 | 8 | 37 | 445519 | 445548 | Bartonella grahamii as4aup, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Bartonellaceae | Bartonella | Bartonella grahamii | ||
| 4870086 | 4870086 | PRJNA1186363_P_NODE_15144_length_508_cov_1.022989_g14258_i0 | PRJNA1186363 | 15144 | 508 | 1.022989 | 5.19678412 | Methylocystis | 133 | Bacteria | Bacteria | 54.7 | 0.014 | NTclustered | gi|2359340975|gb|CP107558.1| | 2654282 | g14258 | i0 | 100 | 0.171259842519685 | 29 | 0 | 6 | 0 | 73 | 101 | 1229881 | 1229853 | Methylocystis sp. MJC1 chromosome, complete genome | blastn | 87 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylocystaceae | Methylocystis | Methylocystis sp. MJC1 | ||
| 4870091 | 4870091 | PRJNA1186363_P_NODE_1864_length_1415_cov_5.114009_g1530_i0 | PRJNA1186363 | 1864 | 1415 | 5.114009 | 72.36322735 | Shewanella | 22 | Bacteria | Bacteria | 54.7 | 0.04 | NTclustered | gi|2040459686|gb|CP074572.1| | 712036 | g1530 | i0 | 100 | 0.0409893992932862 | 29 | 0 | 2 | 0 | 744 | 772 | 1625872 | 1625844 | Shewanella dokdonensis strain DSM 23626 chromosome, complete genome | blastn | 58 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Shewanellaceae | Shewanella | Shewanella dokdonensis | ||
| 5422851 | 5422851 | PRJNA1186363_P_NODE_28025_length_334_cov_1.180077_g27137_i0 | PRJNA1186363 | 28025 | 334 | 1.180077 | 3.94145718 | Glaesserella parasuis | 738 | Bacteria | Bacteria | 52.8 | 0.031 | NTclustered | gi|674177996|gb|CP009237.1| | 738 | g27137 | i0 | 100 | 0.0838323353293413 | 28 | 0 | 8 | 0 | 130 | 157 | 1411860 | 1411833 | Glaesserella parasuis strain KL0318 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Glaesserella | Glaesserella parasuis | ||
| 5422887 | 5422887 | PRJNA1186363_P_NODE_33065_length_291_cov_1.788991_g32177_i0 | PRJNA1186363 | 33065 | 291 | 1.788991 | 5.20596381 | Pseudoduganella aquatica | 2660641 | Bacteria | Bacteria | 63.9 | 1.25e-5 | NTclustered | gi|2136494013|gb|CP086370.1| | 2660641 | g32177 | i0 | 95 | 0.13745704467354 | 40 | 2 | 14 | 0 | 65 | 104 | 5476678 | 5476639 | Pseudoduganella aquatica strain HC52 chromosome, complete genome | blastn | 40 | 63.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Pseudoduganella | Pseudoduganella aquatica | ||
| 5422899 | 5422899 | PRJNA1186363_P_NODE_34425_length_281_cov_2.096154_g33537_i0 | PRJNA1186363 | 34425 | 281 | 2.096154 | 5.89019274 | Acinetobacter larvae | 1789224 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|1051353495|gb|CP016895.1| | 1789224 | g33537 | i0 | 100 | 0.099644128113879 | 28 | 0 | 10 | 0 | 45 | 72 | 2673255 | 2673228 | Acinetobacter larvae strain BRTC-1 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter larvae | ||
| 5422941 | 5422941 | PRJNA1186363_P_NODE_42265_length_245_cov_0.906977_g41377_i0 | PRJNA1186363 | 42265 | 245 | 0.906977 | 2.22209365 | Faucicola osloensis | 34062 | Bacteria | Bacteria | 396 | 8.869999999999996e-106 | NTclustered | gi|1279135894|gb|CP024186.1| | 34062 | g41377 | i0 | 100 | 229.440816326531 | 214 | 0 | 87 | 0 | 32 | 245 | 50194 | 49981 | Moraxella osloensis strain TT16 plasmid p1, complete sequence | blastn | 56213 | 396 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 5422984 | 5422984 | PRJNA1186363_P_NODE_6985_length_803_cov_1.235616_g6196_i0 | PRJNA1186363 | 6985 | 803 | 1.235616 | 9.92199648 | Pararoseomonas sp. SCSIO 73927 | 3114537 | Bacteria | Bacteria | 58.4 | 0.002 | NTclustered | gi|2693424943|gb|CP146232.1| | 3114537 | g6196 | i0 | 94.737 | 0.0473225404732254 | 38 | 0 | 5 | 2 | 182 | 218 | 4113974 | 4113938 | Pararoseomonas sp. SCSIO 73927 chromosome, complete genome | blastn | 38 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Acetobacteraceae | Pararoseomonas | Pararoseomonas sp. SCSIO 73927 | ||
| 6697647 | 6697647 | PRJNA1186363_P_NODE_29226_length_323_cov_1.248000_g28338_i0 | PRJNA1186363 | 29226 | 323 | 1.248 | 4.03104 | Mesorhizobium sp. ISC25 | 3077335 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2810067692|gb|CP135441.1| | 3077335 | g28338 | i0 | 100 | 0.0928792569659443 | 30 | 0 | 9 | 0 | 1 | 30 | 6180173 | 6180202 | Mesorhizobium sp. ISC25 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Mesorhizobium | Mesorhizobium sp. ISC25 | ||
| 8694975 | 8694975 | PRJNA1186363_P_NODE_15487_length_501_cov_1.278037_g14601_i0 | PRJNA1186363 | 15487 | 501 | 1.278037 | 6.40296537 | Variovorax | 34072 | Bacteria | Bacteria | 58.4 | 0.001 | NTclustered | gi|2921406765|gb|CP157609.1| | 1566272 | g14601 | i0 | 97.143 | 1.08183632734531 | 35 | 0 | 7 | 1 | 392 | 426 | 7168662 | 7168629 | Variovorax sp. NFACC29 chromosome, complete genome | blastn | 542 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. NFACC29 | ||
| 8694993 | 8694993 | PRJNA1186363_P_NODE_28107_length_333_cov_1.296154_g27219_i0 | PRJNA1186363 | 28107 | 333 | 1.296154 | 4.31619282 | Delftia | 80865 | Bacteria | Bacteria | 616 | 8.87e-172 | NTclustered | gi|2490585958|gb|CP104581.1| | 180282 | g27219 | i0 | 100 | 364.321321321321 | 333 | 0 | 100 | 0 | 1 | 333 | 683719 | 684051 | Delftia tsuruhatensis strain GD03927 chromosome, complete genome | blastn | 121319 | 616 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia tsuruhatensis | ||
| 9247721 | 9247721 | PRJNA1186363_P_NODE_38408_length_253_cov_0.866667_g37520_i0 | PRJNA1186363 | 38408 | 253 | 0.866667 | 2.19266751 | uncultured Pseudomonadota bacterium | 153809 | Bacteria | Bacteria | 440 | 4.189999999999998e-119 | NTclustered | gi|110753943|gb|DQ828630.1| | 153809 | g37520 | i0 | 98.024 | 100.02371541502 | 253 | 5 | 100 | 0 | 1 | 253 | 309 | 57 | Uncultured proteobacterium clone DOK_CONFYM_clone370 16S ribosomal RNA gene, partial sequence | blastn | 25306 | 440 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | uncultured Pseudomonadota bacterium | ||||||
| 9247750 | 9247750 | PRJNA1186363_P_NODE_44028_length_235_cov_2.833333_g43140_i0 | PRJNA1186363 | 44028 | 235 | 2.833333 | 6.65833255 | Aromatoleum petrolei | 76116 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2023472114|gb|CP059560.1| | 76116 | g43140 | i0 | 100 | 0.127659574468085 | 30 | 0 | 13 | 0 | 206 | 235 | 4436998 | 4437027 | Aromatoleum petrolei strain ToN1 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Rhodocyclales | Rhodocyclaceae | Aromatoleum | Aromatoleum petrolei | ||
| 9970071 | 9970071 | PRJNA1186363_P_NODE_12228_length_581_cov_2.185039_g11346_i0 | PRJNA1186363 | 12228 | 581 | 2.185039 | 12.69507659 | Pseudoxanthomonas | 83618 | Bacteria | Bacteria | 937 | 0 | NTclustered | gi|2523011304|gb|CP095475.1| | 2480810 | g11346 | i0 | 95.719 | 270.889845094664 | 584 | 21 | 100 | 4 | 1 | 581 | 3863554 | 3862972 | Pseudoxanthomonas winnipegensis strain ZSY-33 chromosome, complete genome | blastn | 157387 | 937 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Pseudoxanthomonas | Pseudoxanthomonas winnipegensis | ||
| 10523453 | 10523453 | PRJNA1186363_P_NODE_30389_length_313_cov_1.354167_g29501_i0 | PRJNA1186363 | 30389 | 313 | 1.354167 | 4.23854271 | Vibrio diabolicus | 50719 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1976400539|gb|CP069195.1| | 50719 | g29501 | i0 | 100 | 0.0958466453674121 | 30 | 0 | 10 | 0 | 250 | 279 | 2921270 | 2921241 | Vibrio diabolicus strain SLV18 chromosome 1, complete sequence | blastn | 30 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio diabolicus | ||
| 10523502 | 10523502 | PRJNA1186363_P_NODE_40169_length_249_cov_1.465909_g39281_i0 | PRJNA1186363 | 40169 | 249 | 1.465909 | 3.65011341 | Caldimonas aquatica | 376175 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2840726774|gb|CP171806.1| | 376175 | g39281 | i0 | 100 | 2.24899598393574 | 249 | 0 | 100 | 0 | 1 | 249 | 1321925 | 1322173 | Caldimonas aquatica strain HS-12-14 chromosome, complete genome | blastn | 560 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Caldimonas | Caldimonas aquatica | ||
| 11798448 | 11798448 | PRJNA1186363_P_NODE_40490_length_249_cov_0.886364_g39602_i0 | PRJNA1186363 | 40490 | 249 | 0.886364 | 2.20704636 | Bradyrhizobium sp. PSBB068 | 2715960 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1979381481|gb|CP069300.1| | 2715960 | g39602 | i0 | 100 | 105.016064257028 | 249 | 0 | 100 | 0 | 1 | 249 | 189100 | 189348 | Bradyrhizobium sp. PSBB068 chromosome, complete genome | blastn | 26149 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. PSBB068 | ||
| 11798450 | 11798450 | PRJNA1186363_P_NODE_40590_length_249_cov_0.886364_g39702_i0 | PRJNA1186363 | 40590 | 249 | 0.886364 | 2.20704636 | Phreatobacter cathodiphilus | 1868589 | Bacteria | Bacteria | 455 | 1.47e-123 | NTclustered | gi|1364845349|gb|CP027668.1| | 1868589 | g39702 | i0 | 99.598 | 144.012048192771 | 249 | 1 | 100 | 0 | 1 | 249 | 856697 | 856945 | Phreatobacter cathodiphilus strain S-12 chromosome, complete genome | blastn | 35859 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phreatobacteraceae | Phreatobacter | Phreatobacter cathodiphilus | ||
| 11798451 | 11798451 | PRJNA1186363_P_NODE_40650_length_248_cov_1.337143_g39762_i0 | PRJNA1186363 | 40650 | 248 | 1.337143 | 3.31611464 | Pleomorphomonas sp. PLEO | 3239306 | Bacteria | Bacteria | 351 | 1.97e-92 | NTclustered | gi|2788698862|gb|CP166625.1| | 3239306 | g39762 | i0 | 92.369 | 226.45564516129 | 249 | 16 | 100 | 3 | 1 | 248 | 724390 | 724144 | Pleomorphomonas sp. PLEO chromosome, complete genome | blastn | 56161 | 351 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Pleomorphomonadaceae | Pleomorphomonas | Pleomorphomonas sp. PLEO | ||
| 11798511 | 11798511 | PRJNA1186363_P_NODE_7630_length_764_cov_2.503618_g4923_i1 | PRJNA1186363 | 7630 | 764 | 2.503618 | 19.12764152 | Paraburkholderia dokdonensis | 2211211 | Bacteria | Bacteria | 62.1 | 1.27e-4 | NTclustered | gi|1409665483|gb|CP029641.1| | 2211211 | g4923 | i1 | 94.872 | 0.0510471204188482 | 39 | 2 | 5 | 0 | 137 | 175 | 985040 | 985078 | Paraburkholderia dokdonensis chromosome 2, complete sequence | blastn | 39 | 62.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia dokdonensis | ||
| 13073412 | 13073412 | PRJNA1186363_P_NODE_43431_length_243_cov_0.917647_g42543_i0 | PRJNA1186363 | 43431 | 243 | 0.917647 | 2.22988221 | Stenotrophomonas maltophilia | 40324 | Bacteria | Bacteria | 438 | 1.4399999999999996e-118 | NTclustered | gi|2161673779|gb|CP088244.1| | 40324 | g42543 | i0 | 99.177 | 100 | 243 | 2 | 100 | 0 | 1 | 243 | 348261 | 348019 | Stenotrophomonas maltophilia strain 2013-SM4 chromosome, complete genome | blastn | 24300 | 438 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 14348761 | 14348761 | PRJNA1186363_P_NODE_25732_length_356_cov_1.084806_g24844_i0 | PRJNA1186363 | 25732 | 356 | 1.084806 | 3.86190936 | Orientia tsutsugamushi | 784 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|1389097765|emb|LS398549.1| | 784 | g24844 | i0 | 100 | 0.0814606741573034 | 29 | 0 | 8 | 0 | 16 | 44 | 864339 | 864311 | Orientia tsutsugamushi isolate TA686 genome assembly, chromosome: I | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Rickettsiaceae | Orientia | Orientia tsutsugamushi | ||
| 14348814 | 14348814 | PRJNA1186363_P_NODE_34592_length_280_cov_1.497585_g33704_i0 | PRJNA1186363 | 34592 | 280 | 1.497585 | 4.193238 | Enterobacteriaceae endosymbiont of Donacia simplex | 2675784 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|1833265032|gb|CP046192.1| | 2675784 | g33704 | i0 | 100 | 0.103571428571429 | 29 | 0 | 10 | 0 | 243 | 271 | 320011 | 319983 | Enterobacteriaceae endosymbiont of Donacia simplex isolate DsimSym chromosome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacteriaceae endosymbiont of Donacia simplex | |||
| 14348820 | 14348820 | PRJNA1186363_P_NODE_35492_length_273_cov_1.540000_g34604_i0 | PRJNA1186363 | 35492 | 273 | 1.54 | 4.2042 | Xanthomonas fragariae | 48664 | Bacteria | Bacteria | 62.1 | 4.16e-5 | NTclustered | gi|1198214654|emb|LT853882.1| | 48664 | g34604 | i0 | 97.222 | 13.1721611721612 | 36 | 1 | 13 | 0 | 188 | 223 | 3700578 | 3700543 | Xanthomonas fragariae strain PD885 genome assembly, chromosome: 1 | blastn | 3596 | 62.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas fragariae | ||
| 14348869 | 14348869 | PRJNA1186363_P_NODE_43472_length_243_cov_0.917647_g42584_i0 | PRJNA1186363 | 43472 | 243 | 0.917647 | 2.22988221 | Bradyrhizobium sp. PSBB068 | 2715960 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1979381481|gb|CP069300.1| | 2715960 | g42584 | i0 | 100 | 100.049382716049 | 243 | 0 | 100 | 0 | 1 | 243 | 1787526 | 1787768 | Bradyrhizobium sp. PSBB068 chromosome, complete genome | blastn | 24312 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. PSBB068 | ||
| 15069720 | 15069720 | PRJNA1186363_P_NODE_29192_length_323_cov_1.576000_g28304_i0 | PRJNA1186363 | 29192 | 323 | 1.576 | 5.09048 | Comamonadaceae | 80864 | Bacteria | Bacteria | 551 | 2.449999999999999e-152 | NTclustered | gi|1972901683|gb|CP063167.1| | 34073 | g28304 | i0 | 97.523 | 197.287925696594 | 323 | 6 | 99 | 2 | 2 | 323 | 487626 | 487947 | Variovorax paradoxus strain VAI-C plasmid unnamed, complete sequence | blastn | 63724 | 556 | 0.991007194244604 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 15069722 | 15069722 | PRJNA1186363_P_NODE_30092_length_316_cov_0.962963_g29204_i0 | PRJNA1186363 | 30092 | 316 | 0.962963 | 3.04296308 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.03 | NTclustered | gi|1390249357|gb|CP029343.1| | 945844 | g29204 | i0 | 100 | 0.177215189873418 | 28 | 0 | 9 | 0 | 27 | 54 | 1034696 | 1034723 | Massilia oculi strain CCUG 43427 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia oculi | ||
| 15622553 | 15622553 | PRJNA1186363_P_NODE_3653_length_1087_cov_11.822485_g3121_i0 | PRJNA1186363 | 3653 | 1087 | 11.822485 | 128.51041195 | Variovorax sp. PBS-H4 | 434008 | Bacteria | Bacteria | 93.5 | 6.51e-14 | NTclustered | gi|1795698971|emb|LR594675.1| | 434008 | g3121 | i0 | 88.608 | 137.009199632015 | 79 | 6 | 7 | 2 | 820 | 898 | 2525160 | 2525085 | Variovorax sp. PBS-H4 genome assembly, chromosome: 1 | blastn | 148929 | 93.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. PBS-H4 | ||
| 16344527 | 16344527 | PRJNA1186363_P_NODE_30613_length_311_cov_1.680672_g29725_i0 | PRJNA1186363 | 30613 | 311 | 1.680672 | 5.22688992 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 527 | 3.9599999999999996e-145 | NTclustered | gi|1861348618|gb|CP049828.1| | 29581 | g29725 | i0 | 98.339 | 511.549839228296 | 301 | 4 | 97 | 1 | 1 | 301 | 212801 | 213100 | Janthinobacterium lividum strain EIF2 chromosome, complete genome | blastn | 159092 | 529 | 0.996219281663516 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | Janthinobacterium lividum | ||
| 16896716 | 16896716 | PRJNA1186363_P_NODE_10234_length_647_cov_1.522648_g9356_i0 | PRJNA1186363 | 10234 | 647 | 1.522648 | 9.85153256 | Gilliamella apicola | 1196095 | Bacteria | Bacteria | 270 | 1.6299999999999998e-67 | NTclustered | gi|2563321002|gb|CP132380.1| | 1196095 | g9356 | i0 | 85.283 | 28.5023183925811 | 265 | 35 | 41 | 4 | 1 | 263 | 2253004 | 2252742 | Gilliamella apicola strain ESL0178 chromosome, complete genome | blastn | 18441 | 270 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Orbales | Orbaceae | Gilliamella | Gilliamella apicola | ||
| 16896814 | 16896814 | PRJNA1186363_P_NODE_19294_length_433_cov_3.233333_g18406_i0 | PRJNA1186363 | 19294 | 433 | 3.233333 | 14.00033189 | Burkholderia anthina | 179879 | Bacteria | Bacteria | 52.8 | 0.042 | NTclustered | gi|1951799260|gb|CP066769.1| | 179879 | g18406 | i0 | 100 | 0.0646651270207852 | 28 | 0 | 6 | 0 | 160 | 187 | 1649384 | 1649357 | Burkholderia anthina strain BJQ0011 chromosome 1, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia anthina | ||
| 18171381 | 18171381 | PRJNA1186363_P_NODE_34895_length_278_cov_1.141463_g34007_i0 | PRJNA1186363 | 34895 | 278 | 1.141463 | 3.17326714 | Pseudoalteromonas xiamenensis | 882626 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2571540407|gb|CP099917.1| | 882626 | g34007 | i0 | 100 | 0.10431654676259 | 29 | 0 | 10 | 0 | 238 | 266 | 3671275 | 3671247 | Pseudoalteromonas xiamenensis strain PSDB chromosome 1, complete sequence | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Pseudoalteromonadaceae | Pseudoalteromonas | Pseudoalteromonas xiamenensis | ||
| 18171392 | 18171392 | PRJNA1186363_P_NODE_36555_length_265_cov_1.307292_g35667_i0 | PRJNA1186363 | 36555 | 265 | 1.307292 | 3.4643238 | Pseudomonas lalucatii | 1424203 | Bacteria | Bacteria | 58.4 | 5.21e-4 | NTclustered | gi|2042560102|gb|CP065340.1| | 1424203 | g35667 | i0 | 97.143 | 0.237735849056604 | 35 | 0 | 13 | 1 | 39 | 73 | 196740 | 196707 | Pseudomonas lalucatii strain R1b52 chromosome | blastn | 63 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas lalucatii | ||
| 20721039 | 20721039 | PRJNA1186363_P_NODE_18597_length_445_cov_1.115591_g17709_i0 | PRJNA1186363 | 18597 | 445 | 1.115591 | 4.96437995 | Salmonella enterica | 28901 | Bacteria | Bacteria | 60.2 | 2.57e-4 | NTclustered | gi|1821144251|gb|CP049874.1| | 2021403 | g17709 | i0 | 100 | 16.7865168539326 | 32 | 0 | 7 | 0 | 362 | 393 | 737100 | 737131 | Salmonella enterica subsp. enterica serovar Adjame strain 374589 chromosome, complete genome | blastn | 7470 | 60.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 20721152 | 20721152 | PRJNA1186363_P_NODE_34817_length_278_cov_1.902439_g33929_i0 | PRJNA1186363 | 34817 | 278 | 1.902439 | 5.28878042 | Pseudomonas helleri | 1608996 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|2913959169|gb|CP181271.1| | 1608996 | g33929 | i0 | 94.286 | 0.12589928057554 | 35 | 1 | 13 | 1 | 128 | 162 | 1234513 | 1234546 | MAG: Pseudomonas helleri isolate UW_FK_PSEUD1_1 chromosome | blastn | 35 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas helleri | ||
| 21443904 | 21443904 | PRJNA1186363_P_NODE_11017_length_621_cov_1.450730_g10135_i0 | PRJNA1186363 | 11017 | 621 | 1.45073 | 9.0090333 | Achromobacter | 222 | Bacteria | Bacteria | 1027 | 0 | NTclustered | gi|1073951170|gb|CP017433.1| | 72557 | g10135 | i0 | 96.469 | 321.565217391304 | 623 | 20 | 100 | 2 | 1 | 621 | 691612 | 692234 | Achromobacter ruhlandii strain SCCH3:ACH 33-1365 genome | blastn | 199692 | 1027 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | Achromobacter ruhlandii | ||
| 21996318 | 21996318 | PRJNA1186363_P_NODE_11838_length_593_cov_2.357692_g10956_i0 | PRJNA1186363 | 11838 | 593 | 2.357692 | 13.98111356 | Janthinobacterium sp. HH102 | 1537274 | Bacteria | Bacteria | 63.9 | 2.71e-5 | NTclustered | gi|1922988912|gb|CP062062.1| | 1537274 | g10956 | i0 | 95 | 5.57504215851602 | 40 | 2 | 7 | 0 | 256 | 295 | 5248699 | 5248738 | Janthinobacterium sp. HH102 chromosome, complete genome | blastn | 3306 | 63.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | Janthinobacterium sp. HH102 | ||
| 21996416 | 21996416 | PRJNA1186363_P_NODE_22978_length_386_cov_0.984026_g22090_i0 | PRJNA1186363 | 22978 | 386 | 0.984026 | 3.79834036 | Massilia atriviolacea | 2495579 | Bacteria | Bacteria | 52.8 | 0.037 | NTclustered | gi|2853209876|gb|CP051166.1| | 2495579 | g22090 | i0 | 100 | 0.0725388601036269 | 28 | 0 | 7 | 0 | 301 | 328 | 2869484 | 2869457 | Massilia atriviolacea strain SOD chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia atriviolacea | ||
| 21996512 | 21996512 | PRJNA1186363_P_NODE_38238_length_253_cov_1.033333_g37350_i0 | PRJNA1186363 | 38238 | 253 | 1.033333 | 2.61433249 | Marichromatium purpuratum | 37487 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|570731247|gb|CP007031.1| | 765910 | g37350 | i0 | 100 | 0.114624505928854 | 29 | 0 | 11 | 0 | 113 | 141 | 1730619 | 1730647 | Marichromatium purpuratum 984, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Marichromatium | Marichromatium purpuratum | ||
| 21996564 | 21996564 | PRJNA1186363_P_NODE_5618_length_899_cov_3.061743_g4923_i0 | PRJNA1186363 | 5618 | 899 | 3.061743 | 27.52506957 | Paraburkholderia dokdonensis | 2211211 | Bacteria | Bacteria | 62.1 | 1.51e-4 | NTclustered | gi|1409665483|gb|CP029641.1| | 2211211 | g4923 | i0 | 94.872 | 0.0433815350389321 | 39 | 2 | 4 | 0 | 725 | 763 | 985078 | 985040 | Paraburkholderia dokdonensis chromosome 2, complete sequence | blastn | 39 | 62.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia dokdonensis | ||
| 23271927 | 23271927 | PRJNA1186363_P_NODE_27219_length_342_cov_0.869888_g26331_i0 | PRJNA1186363 | 27219 | 342 | 0.869888 | 2.97501696 | Bradyrhizobium japonicum | 375 | Bacteria | Bacteria | 62.1 | 5.37e-5 | NTclustered | gi|2235744812|gb|CP081350.1| | 375 | g26331 | i0 | 89.583 | 0.140350877192982 | 48 | 5 | 14 | 0 | 12 | 59 | 5801828 | 5801875 | Bradyrhizobium japonicum strain S10J-BJ chromosome, complete genome | blastn | 48 | 62.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium japonicum | ||
| 23271942 | 23271942 | PRJNA1186363_P_NODE_30379_length_313_cov_1.495833_g29491_i0 | PRJNA1186363 | 30379 | 313 | 1.495833 | 4.68195729 | Methylobacterium brachiatum | 269660 | Bacteria | Bacteria | 65.8 | 3.76e-6 | NTclustered | gi|1498425080|gb|CP033231.1| | 269660 | g29491 | i0 | 100 | 5.7667731629393 | 35 | 0 | 11 | 0 | 159 | 193 | 5234938 | 5234972 | Methylobacterium brachiatum strain TX0642 chromosome | blastn | 1805 | 65.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium brachiatum | ||
| 23272006 | 23272006 | PRJNA1186363_P_NODE_40419_length_249_cov_0.886364_g39531_i0 | PRJNA1186363 | 40419 | 249 | 0.886364 | 2.20704636 | Paracoccus sanguinis | 1545044 | Bacteria | Bacteria | 377 | 3.27e-100 | NTclustered | gi|1834246727|gb|CP051542.1| | 1545044 | g39531 | i0 | 94.024 | 2.33333333333333 | 251 | 11 | 100 | 3 | 1 | 249 | 2687552 | 2687800 | Paracoccus sanguinis strain OM2164 chromosome, complete genome | blastn | 581 | 377 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus sanguinis | ||
| 23994104 | 23994104 | PRJNA1186363_P_NODE_11019_length_621_cov_1.383212_g10137_i0 | PRJNA1186363 | 11019 | 621 | 1.383212 | 8.58974652 | Burkholderiaceae | 119060 | Bacteria | Bacteria | 67.6 | 2.2e-6 | NTclustered | gi|2028341685|dbj|AP024322.1| | 140098 | g10137 | i0 | 97.436 | 0.251207729468599 | 39 | 1 | 10 | 0 | 118 | 156 | 2179800 | 2179838 | Burkholderia sp. NK8 DNA, chromosome 1, complete sequence | blastn | 156 | 67.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Caballeronia | Caballeronia sp. NK8 | ||
| 24545638 | 24545638 | PRJNA1186363_P_NODE_14220_length_530_cov_1.024070_g13336_i0 | PRJNA1186363 | 14220 | 530 | 1.02407 | 5.427571 | Zymobacter sp. IVIA_5232.4 C2 | 3394855 | Bacteria | Bacteria | 54.7 | 0.014 | NTclustered | gi|2904223134|gb|CP179928.1| | 3394855 | g13336 | i0 | 100 | 0.0547169811320755 | 29 | 0 | 5 | 0 | 443 | 471 | 2195519 | 2195547 | Zymobacter sp. IVIA_5232.4 C2 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Zymobacter | Zymobacter sp. IVIA_5232.4 C2 | ||
| 24545683 | 24545683 | PRJNA1186363_P_NODE_18540_length_445_cov_3.736559_g17652_i0 | PRJNA1186363 | 18540 | 445 | 3.736559 | 16.62768755 | Achromobacter sp. B7 | 2282475 | Bacteria | Bacteria | 73.1 | 3.31e-8 | NTclustered | gi|1483529537|gb|CP032084.1| | 2282475 | g17652 | i0 | 97.619 | 22.2696629213483 | 42 | 1 | 9 | 0 | 151 | 192 | 2691473 | 2691432 | Achromobacter sp. B7 chromosome, complete genome | blastn | 9910 | 73.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | Achromobacter sp. B7 | ||
| 25268237 | 25268237 | PRJNA1186363_P_NODE_6300_length_847_cov_61.466408_g5553_i0 | PRJNA1186363 | 6300 | 847 | 61.466408 | 520.62047576 | Serratia | 613 | Bacteria | Bacteria | 54.7 | 0.024 | NTclustered | gi|1654144183|gb|CP040182.1| | 47917 | g5553 | i0 | 100 | 0.582054309327037 | 29 | 0 | 3 | 0 | 431 | 459 | 3283346 | 3283374 | Serratia fonticola strain MS5 chromosome, complete genome | blastn | 493 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Yersiniaceae | Serratia | Serratia fonticola |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;