RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1186363" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA1186363 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7973004 7973004 PRJNA1186363_P_NODE_2947_length_1189_cov_4.541219_g2485_i0 PRJNA1186363 2947 1189 4.541219 53.99509391 Halorussus limi 2938695 Archaea Archaea 54.7 0.034   NTclustered gi|2234300126|gb|CP096659.1| 2938695 g2485 i0 100 0.024390243902439 29 0 2 0 1044 1072 170444 170472 Halorussus limi strain XZYJT49 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haladaptataceae Halorussus Halorussus limi
18171472 18171472 PRJNA1186363_P_NODE_7515_length_770_cov_1.713056_g6708_i0 PRJNA1186363 7515 770 1.713056 13.1905312 Natronorubrum aibiense 348826 Archaea Archaea 56.5 0.006   NTclustered gi|1770793304|gb|CP045488.1| 348826 g6708 i0 94.595 0.0480519480519481 37 0 5 2 134 169 342667 342702 Natronorubrum aibiense strain 7-3 chromosome, complete genome blastn 37 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum aibiense
24545780 24545780 PRJNA1186363_P_NODE_34100_length_283_cov_2.028571_g33212_i0 PRJNA1186363 34100 283 2.028571 5.74085593 Methanomethylovorans hollandica 101192 Archaea Archaea 52.8 0.026   NTclustered gi|433660872|gb|CP003362.1| 867904 g33212 i0 100 0.0989399293286219 28 0 10 0 52 79 2196379 2196406 Methanomethylovorans hollandica DSM 15978, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanomethylovorans Methanomethylovorans hollandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;