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contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJNA1186363" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 28 ✖

bioproject 1

  • PRJNA1186363 · 28 ✖

analysis 1

  • blastn · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1041987 1041987 PRJNA1186363_P_NODE_31201_length_306_cov_2.163090_g30313_i0 PRJNA1186363 31201 306 2.16309 6.6190554 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.008   NTclustered gi|330791379|ref|XM_003283723.1| 5786 g30313 i0 92.308 2.66666666666667 39 2 13 1 211 249 2867 2904 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_52503), partial mRNA blastn 816 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
2317355 2317355 PRJNA1186363_P_NODE_7642_length_763_cov_4.289855_g6831_i0 PRJNA1186363 7642 763 4.289855 32.73159365 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.006   NTclustered gi|66811303|ref|XM_634268.1| 352472 g6831 i0 100 0.121887287024902 30 0 4 0 318 347 3598 3569 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0282851) mRNA, complete cds blastn 93 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
2870550 2870550 PRJNA1186363_P_NODE_29523_length_320_cov_1.902834_g28635_i0 PRJNA1186363 29523 320 1.902834 6.0890688 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 337 7.4e-88   NTclustered gi|470458047|ref|XM_004341152.1| 1257118 g28635 i0 85.849 191.103125 318 43 99 2 4 320 510 194 Acanthamoeba castellanii str. Neff polyubiquitin, putative (ACA1_335920), partial mRNA blastn 61153 337 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2870610 2870610 PRJNA1186363_P_NODE_41423_length_247_cov_0.896552_g40535_i0 PRJNA1186363 41423 247 0.896552 2.21448344 Entamoeba dispar 46681 Evosea other_Eukaryota 215 2.69e-51   NTclustered gi|167393790|ref|XM_001740659.1| 370354 g40535 i0 83.193 14.587044534413 238 36 96 4 1 236 914 1149 Entamoeba dispar SAW760 vacuolar ATP synthase catalytic subunit A, putative (EDI_037820), partial mRNA blastn 3603 215 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
4146562 4146562 PRJNA1186363_P_NODE_18584_length_445_cov_1.258065_g17696_i0 PRJNA1186363 18584 445 1.258065 5.59838925 Cavenderia fasciculata 261658 Evosea other_Eukaryota 56.5 0.003   NTclustered gi|470263681|ref|XM_004360930.1| 261658 g17696 i0 97.059 0.606741573033708 34 0 7 1 114 146 724 757 Cavenderia fasciculata uncharacterized protein (DFA_05266), partial mRNA blastn 270 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
4146683 4146683 PRJNA1186363_P_NODE_35804_length_271_cov_1.020202_g34916_i0 PRJNA1186363 35804 271 1.020202 2.76474742 Dictyostelium purpureum 5786 Evosea other_Eukaryota 270 6.3e-68   NTclustered gi|330805726|ref|XM_003290782.1| 5786 g34916 i0 87.826 36.3321033210332 230 28 85 0 40 269 1742 1513 Dictyostelium purpureum cell division cycle protein 48 (DICPUDRAFT_81538), partial mRNA blastn 9846 270 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
5422833 5422833 PRJNA1186363_P_NODE_26085_length_352_cov_1.784946_g25197_i0 PRJNA1186363 26085 352 1.784946 6.28300992 Arcyria denudata 283669 Evosea other_Eukaryota 222 2.3999999999999996e-53   NTclustered gi|56156690|gb|AY643820.1| 283669 g25197 i0 79.141 71.3267045454545 326 64 92 4 29 352 1277 954 Arcyria denudata elongation factor 1A (EF1A) gene, partial cds blastn 25107 222 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria denudata
5422956 5422956 PRJNA1186363_P_NODE_4905_length_954_cov_2.342792_g4259_i0 PRJNA1186363 4905 954 2.342792 22.35023568 Heterostelium album 2086695 Evosea other_Eukaryota 686 0   NTclustered gi|1160553732|ref|XM_020572691.1| 670386 g4259 i0 80.461 73.8459119496855 911 166 95 9 36 940 19 923 Polysphondylium pallidum PN500 elongation factor 1 alpha (efaAI), partial mRNA blastn 70449 686 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
7972907 7972907 PRJNA1186363_P_NODE_16987_length_471_cov_2.497487_g16100_i0 PRJNA1186363 16987 471 2.497487 11.76316377 Coronamoeba villafranca 2936289 Discosea other_Eukaryota 435 3.89e-117   NTclustered gi|2254079205|gb|ON260836.1| 2936289 g16100 i0 83.404 98.2547770700637 470 76 99 2 3 471 662 194 Dermamoebida sp. AKudryavtsev-2022a strain ZIN.2022.02 clone 6 actin gene, partial cds blastn 46278 435 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Coronamoeba Coronamoeba villafranca
7972938 7972938 PRJNA1186363_P_NODE_2007_length_1373_cov_1.667692_g1652_i0 PRJNA1186363 2007 1373 1.667692 22.89741116 Dictyostelium discoideum 44689 Evosea other_Eukaryota 58.4 0.003   NTclustered gi|66811531|ref|XM_634854.1| 352472 g1652 i0 100 0.088856518572469 31 0 2 0 722 752 242 272 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0284943) mRNA, complete cds blastn 122 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
7973059 7973059 PRJNA1186363_P_NODE_39327_length_251_cov_0.876404_g38439_i0 PRJNA1186363 39327 251 0.876404 2.19977404 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 387 5.489999999999998e-103   NTclustered gi|470395276|ref|XM_004335009.1| 1257118 g38439 i0 94.422 1 251 14 100 0 1 251 490 740 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_097280), partial mRNA blastn 251 387 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7973077 7973077 PRJNA1186363_P_NODE_41987_length_246_cov_0.901734_g41099_i0 PRJNA1186363 41987 246 0.901734 2.21826564 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 372 1.5e-98   NTclustered gi|470507538|ref|XM_004367569.1| 1257118 g41099 i0 93.902 1 246 15 100 0 1 246 176 421 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_253670), partial mRNA blastn 246 372 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9247699 9247699 PRJNA1186363_P_NODE_34968_length_277_cov_1.529412_g34080_i0 PRJNA1186363 34968 277 1.529412 4.23647124 Copromyxa protea 931554 Tubulinea other_Eukaryota 265 3.0099999999999997e-66   NTclustered gi|1042160913|dbj|LC102263.1| 931554 g34080 i0 88.837 94.2671480144404 215 24 78 0 1 215 580 794 Copromyxa protea gene for actin, partial cds, strain: LUM_cl4 blastn 26112 265 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
10523374 10523374 PRJNA1186363_P_NODE_18809_length_441_cov_1.913043_g17921_i0 PRJNA1186363 18809 441 1.913043 8.43651963 Acytostelium subglobosum 361139 Evosea other_Eukaryota 52.8 0.043   NTclustered gi|831778449|ref|XM_012899960.1| 1410327 g17921 i0 100 0.0634920634920635 28 0 6 0 146 173 792 819 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
10523434 10523434 PRJNA1186363_P_NODE_28069_length_334_cov_0.839080_g27181_i0 PRJNA1186363 28069 334 0.83908 2.8025272 Heterostelium album 2086695 Evosea other_Eukaryota 52.8 0.031   NTclustered gi|1160563546|ref|XM_020579988.1| 670386 g27181 i0 100 0.0838323353293413 28 0 8 0 281 308 619 592 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
11798394 11798394 PRJNA1186363_P_NODE_31790_length_301_cov_12.232456_g30902_i0 PRJNA1186363 31790 301 12.232456000000001 36.81969256 Heterostelium album 2086695 Evosea other_Eukaryota 246 1.2e-60   NTclustered gi|1160557950|ref|XM_020575808.1| 670386 g30902 i0 82.192 207.378737541528 292 46 96 5 1 289 646 358 Polysphondylium pallidum PN500 ubiquitin (ubqI), partial mRNA blastn 62421 246 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
11798424 11798424 PRJNA1186363_P_NODE_36570_length_265_cov_1.218750_g35682_i0 PRJNA1186363 36570 265 1.21875 3.2296875 Thecamoeba similis 242545 Discosea other_Eukaryota 291 4.71e-74   NTclustered gi|33946350|gb|AY294154.1| 242545 g35682 i0 87.352 90.5056603773585 253 32 95 0 13 265 36 288 Thecamoeba similis actin mRNA, complete cds blastn 23984 291 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
13073362 13073362 PRJNA1186363_P_NODE_3451_length_1114_cov_1.741595_g2941_i0 PRJNA1186363 3451 1114 1.741595 19.4013683 Copromyxa protea 931554 Tubulinea other_Eukaryota 909 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g2941 i0 81.664 2.80520646319569 1118 184 99 16 1 1103 274 1385 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 3125 909 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
13073404 13073404 PRJNA1186363_P_NODE_41471_length_247_cov_0.896552_g40583_i0 PRJNA1186363 41471 247 0.896552 2.21448344 Acytostelium subglobosum 361139 Evosea other_Eukaryota 52.8 0.022   NTclustered gi|831777097|ref|XM_012899548.1| 1410327 g40583 i0 100 0.11336032388664 28 0 11 0 105 132 342 315 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
15069728 15069728 PRJNA1186363_P_NODE_34732_length_279_cov_1.247573_g33844_i0 PRJNA1186363 34732 279 1.247573 3.48072867 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.026   NTclustered gi|330798671|ref|XM_003287327.1| 5786 g33844 i0 100 1.20430107526882 28 0 10 0 3 30 1437 1464 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_151466), partial mRNA blastn 336 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
15622471 15622471 PRJNA1186363_P_NODE_20473_length_417_cov_1.912791_g19585_i0 PRJNA1186363 20473 417 1.912791 7.97633847 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 582 1.1499999999999996e-161   NTclustered gi|33946346|gb|AY294152.1| 242541 g19585 i0 91.866 96.9640287769784 418 32 100 2 1 417 516 932 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 40434 582 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
15622573 15622573 PRJNA1186363_P_NODE_39373_length_251_cov_0.876404_g38485_i0 PRJNA1186363 39373 251 0.876404 2.19977404 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 448 2.48e-121   NTclustered gi|470525862|ref|XM_004356613.1| 1257118 g38485 i0 98.805 65.7729083665339 251 3 100 0 1 251 949 699 Acanthamoeba castellanii str. Neff asparagine-tRNA ligase (ACA1_174260), partial mRNA blastn 16509 448 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15622598 15622598 PRJNA1186363_P_NODE_43753_length_242_cov_0.923077_g42865_i0 PRJNA1186363 43753 242 0.923077 2.23384634 Acytostelium subglobosum 361139 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|831768665|ref|XM_012897019.1| 1410327 g42865 i0 100 0.119834710743802 29 0 12 0 202 230 148 176 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
16896839 16896839 PRJNA1186363_P_NODE_22294_length_394_cov_0.968847_g21406_i0 PRJNA1186363 22294 394 0.968847 3.81725718 Paramoeba branchiphila 308475 Discosea other_Eukaryota 374 7.079999999999998e-99   NTclustered gi|226347442|gb|FJ807261.1| 308475 g21406 i0 84.293 87.761421319797 382 58 97 2 1 381 808 428 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 34578 374 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
16896945 16896945 PRJNA1186363_P_NODE_41754_length_246_cov_0.901734_g40866_i0 PRJNA1186363 41754 246 0.901734 2.21826564 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 422 1.47e-113   NTclustered gi|470506274|ref|XM_004348681.1| 1257118 g40866 i0 97.561 1 246 6 100 0 1 246 1414 1169 Acanthamoeba castellanii str. Neff cation exchanger, putative (ACA1_035470), partial mRNA blastn 246 422 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19445794 19445794 PRJNA1186363_P_NODE_32136_length_299_cov_0.920354_g31248_i0 PRJNA1186363 32136 299 0.920354 2.75185846 Heterostelium album 2086695 Evosea other_Eukaryota 52.8 0.028   NTclustered gi|1160558244|ref|XM_020575955.1| 670386 g31248 i0 96.774 0.103678929765886 31 1 10 0 163 193 1565 1535 Polysphondylium pallidum PN500 putative protein serine/threonine kinase partial mRNA blastn 31 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
21996471 21996471 PRJNA1186363_P_NODE_32458_length_296_cov_1.322870_g31570_i0 PRJNA1186363 32458 296 1.32287 3.9156952 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 375 1.4399999999999995e-99   NTclustered gi|33946346|gb|AY294152.1| 242541 g31570 i0 89.761 87.7837837837838 293 30 99 0 4 296 807 515 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 25984 375 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
23994130 23994130 PRJNA1186363_P_NODE_30899_length_309_cov_1.042373_g30011_i0 PRJNA1186363 30899 309 1.042373 3.22093257 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 272 2.0299999999999998e-68   NTclustered gi|2274919|emb|AJ000063.1| 44689 g30011 i0 86.585 80.7734627831715 246 33 80 0 41 286 100 345 Dictyostelium discoideum mRNA for ADP-ribosylation factor 1 blastn 24959 272 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;