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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA1180292" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1180292 · 22 ✖

analysis 1

  • blastn · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
317885 317885 PRJNA1180292_P_NODE_10421_length_248_cov_0.885714_g10289_i0 PRJNA1180292 10421 248 0.885714 2.19657072 Philodina megalotrocha 1234259 Rotifera other_Eukaryota 459 1.13e-124   NTclustered gi|1976325703|gb|MW577596.1| 1234259 g10289 i0 100 97.1895161290323 248 0 100 0 1 248 568 321 Philodina megalotrocha isolate RiGrAm.2.1 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 24103 459 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina megalotrocha
1592520 1592520 PRJNA1180292_P_NODE_1582_length_547_cov_1.856540_g1450_i0 PRJNA1180292 1582 547 1.85654 10.1552738 Brachionus angularis 396692 Rotifera other_Eukaryota 431 5.91e-116   NTclustered gi|1999716438|gb|MT875426.1| 396692 g1450 i0 81.227 70.2632541133455 538 97 98 4 11 546 856 1391 Brachionus angularis chromosome II mitochondrion, complete sequence blastn 38434 431 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
1592534 1592534 PRJNA1180292_P_NODE_3402_length_372_cov_1.040134_g3270_i0 PRJNA1180292 3402 372 1.040134 3.86929848 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 244 5.44e-60   NTclustered gi|1405682199|gb|MH231831.1| 96890 g3270 i0 80.968 0.833333333333333 310 57 83 2 1 309 309 1 Brachionus rotundiformis GABA receptor-associated protein-like-2 mRNA, complete cds blastn 310 244 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis
1592544 1592544 PRJNA1180292_P_NODE_422_length_1080_cov_3.836147_g329_i0 PRJNA1180292 422 1080 3.836147 41.4303876 Brachionus rubens 392764 Rotifera other_Eukaryota 496 4.22e-135   NTclustered gi|632795131|gb|KJ489418.1| 392764 g329 i0 75.364 2.46574074074074 1100 233 99 32 3 1077 5908 6994 Brachionus rubens chromosome II mitochondrion, complete sequence blastn 2663 496 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
3591707 3591707 PRJNA1180292_P_NODE_583_length_926_cov_1.597890_g472_i0 PRJNA1180292 583 926 1.59789 14.7964614 Ploima 84394 Rotifera other_Eukaryota 165 1.15e-35   NTclustered gi|56412199|gb|AY647202.1| 183146 g472 i0 76.636 13.719222462203 321 61 34 14 7 321 11 323 Brachionus sp. Austria 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 12704 165 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus sp. Austria
4144779 4144779 PRJNA1180292_P_NODE_3504_length_366_cov_1.484642_g3372_i0 PRJNA1180292 3504 366 1.484642 5.43378972 Adineta vaga 104782 Rotifera other_Eukaryota 379 1.3999999999999995e-100   NTclustered gi|402761771|gb|JX184017.1| 104782 g3372 i0 86.589 15.1092896174863 343 46 94 0 1 343 403 61 Adineta vaga cytochrome c oxidase subunit 3 (COX3) gene, partial cds; mitochondrial blastn 5530 379 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
6695742 6695742 PRJNA1180292_P_NODE_3586_length_362_cov_1.079585_g3454_i0 PRJNA1180292 3586 362 1.079585 3.9080977 Brachionus caudatus 575211 Rotifera other_Eukaryota 230 1.4799999999999995e-55   NTclustered gi|2057213584|gb|MZ438224.1| 575211 g3454 i0 80.195 74.5469613259668 308 59 85 2 13 319 453 759 Brachionus caudatus isolate Bcau_FH cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 26986 230 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus caudatus
6695744 6695744 PRJNA1180292_P_NODE_366_length_1136_cov_40.111947_g279_i0 PRJNA1180292 366 1136 40.111947 455.67171792 Brachionus koreanus 1199090 Rotifera other_Eukaryota 488 7.44e-133   NTclustered gi|477541870|gb|KC603851.1| 1199090 g279 i0 80.572 36.6778169014084 664 103 58 23 6 660 10207 9561 Brachionus sp. 'koreanus' chromosome I mitochondrion, complete sequence blastn 41666 488 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus koreanus
9245734 9245734 PRJNA1180292_P_NODE_1368_length_588_cov_2.271845_g1236_i0 PRJNA1180292 1368 588 2.271845 13.3584486 Brachionus falcatus 392765 Rotifera other_Eukaryota 204 1.5199999999999998e-47   NTclustered gi|2615504969|gb|OR665529.1| 392765 g1236 i0 73.86 1.10034013605442 570 123 95 22 4 560 10913 10357 Brachionus falcatus chromosome 2 mitochondrion, complete sequence blastn 647 204 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus falcatus
9245756 9245756 PRJNA1180292_P_NODE_428_length_1067_cov_3.031187_g334_i0 PRJNA1180292 428 1067 3.031187 32.34276529 Brachionus rubens 392764 Rotifera other_Eukaryota 682 0   NTclustered gi|632795126|gb|KJ489417.1| 392764 g334 i0 78.736 33.3655107778819 1044 204 97 14 3 1037 22 1056 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 35601 682 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
9969341 9969341 PRJNA1180292_P_NODE_13048_length_242_cov_0.923077_g12916_i0 PRJNA1180292 13048 242 0.923077 2.23384634 Ploima 84394 Rotifera other_Eukaryota 67.6 7.78e-7   NTclustered gi|1859640894|gb|MN970216.1| 360698 g12916 i0 89.286 3.55785123966942 56 3 22 3 97 150 8249 8195 Proales similis mitochondrion, complete genome blastn 861 67.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
10521438 10521438 PRJNA1180292_P_NODE_1009_length_697_cov_1.245192_g880_i0 PRJNA1180292 1009 697 1.245192 8.67898824 Habrotrocha constricta 104786 Rotifera other_Eukaryota 915 0   NTclustered gi|402761741|gb|JX184002.1| 104786 g880 i0 90.896 88.8249641319943 681 62 98 0 1 681 768 1448 Habrotrocha constricta cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 61911 915 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
11796491 11796491 PRJNA1180292_P_NODE_370_length_1127_cov_72.043643_g283_i0 PRJNA1180292 370 1127 72.043643 811.93185661 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 401 9.889999999999998e-107   NTclustered gi|1066800225|gb|KX364936.1| 96890 g283 i0 80.389 35.0248447204969 566 79 49 29 563 1117 9500 10044 Brachionus rotundiformis chromosome I mitochondrion, complete sequence blastn 39473 401 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis
13071488 13071488 PRJNA1180292_P_NODE_3111_length_388_cov_1.834921_g2979_i0 PRJNA1180292 3111 388 1.834921 7.11949348 Lepadella patella 231622 Rotifera other_Eukaryota 520 8.45e-143   NTclustered gi|83285192|gb|DQ297739.1| 231622 g2979 i0 90.769 26.479381443299 390 34 100 2 1 388 733 344 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 10274 520 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella
15620659 15620659 PRJNA1180292_P_NODE_573_length_937_cov_3.488426_g462_i0 PRJNA1180292 573 937 3.488426 32.68655162 Brachionus angularis 396692 Rotifera other_Eukaryota 745 0   NTclustered gi|1999716438|gb|MT875426.1| 396692 g462 i0 81.07 72.5389541088581 935 175 99 2 2 935 23 956 Brachionus angularis chromosome II mitochondrion, complete sequence blastn 67969 745 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
15620705 15620705 PRJNA1180292_P_NODE_913_length_731_cov_5.352584_g786_i0 PRJNA1180292 913 731 5.352584 39.12738904 Philodina citrina 468664 Rotifera other_Eukaryota 643 9.489999999999997e-180   NTclustered gi|407227484|emb|FR856884.1| 468664 g786 i0 83.062 22.5882352941176 738 95 99 27 4 729 2393 1674 Philodina citrina complete mitochondrial genome blastn 16512 643 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
18169490 18169490 PRJNA1180292_P_NODE_1955_length_489_cov_2.360577_g1823_i0 PRJNA1180292 1955 489 2.360577 11.54322153 Philodina citrina 468664 Rotifera other_Eukaryota 616 1.3499999999999996e-171   NTclustered gi|407227484|emb|FR856884.1| 468664 g1823 i0 89.655 40.5664621676892 493 38 99 10 1 487 1669 2154 Philodina citrina complete mitochondrial genome blastn 19837 616 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
19443840 19443840 PRJNA1180292_P_NODE_1796_length_512_cov_2.164009_g1664_i0 PRJNA1180292 1796 512 2.164009 11.07972608 Ascomorpha ovalis 360655 Rotifera other_Eukaryota 409 2.58e-109   NTclustered gi|2057213416|gb|MZ438165.1| 360655 g1664 i0 81.262 74.515625 507 89 98 6 1 504 156 659 Ascomorpha ovalis isolate Aova_PX cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial blastn 38152 409 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropidae Ascomorpha Ascomorpha ovalis
19443881 19443881 PRJNA1180292_P_NODE_616_length_900_cov_2.536880_g501_i0 PRJNA1180292 616 900 2.53688 22.83192 Brachionus rubens 392764 Rotifera other_Eukaryota 364 1.03e-95   NTclustered gi|632795126|gb|KJ489417.1| 392764 g501 i0 75.176 2.53777777777778 854 171 93 28 45 882 9249 8421 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 2284 364 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
23270023 23270023 PRJNA1180292_P_NODE_3659_length_358_cov_1.073684_g3527_i0 PRJNA1180292 3659 358 1.073684 3.84378872 Brachionus rubens 392764 Rotifera other_Eukaryota 226 1.8899999999999998e-54   NTclustered gi|632795126|gb|KJ489417.1| 392764 g3527 i0 79.872 35.7122905027933 313 59 87 4 4 314 553 863 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 12785 226 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
23270059 23270059 PRJNA1180292_P_NODE_7199_length_263_cov_1.626316_g7067_i0 PRJNA1180292 7199 263 1.626316 4.27721108 Philodina sp. CWB-2005 338313 Rotifera other_Eukaryota 394 3.46e-105   NTclustered gi|71840298|gb|DQ078596.1| 338313 g7067 i0 94.186 98.6083650190114 258 15 98 0 6 263 385 128 Philodina sp. CWB-2005 clone Bir1.1 cytochrome oxidase subunit 1 (cox1) gene, partial cds; mitochondrial blastn 25934 394 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina sp. CWB-2005
24543835 24543835 PRJNA1180292_P_NODE_1380_length_585_cov_6.791016_g1248_i0 PRJNA1180292 1380 585 6.791016 39.7274436 Brachionus rubens 392764 Rotifera other_Eukaryota 231 6.92e-56   NTclustered gi|1802791198|gb|MN256531.1| 392764 g1248 i0 77.372 0.702564102564103 411 80 69 13 175 578 10202 10606 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 411 231 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;