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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA1180292" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 31 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1180292 · 31 ✖

analysis 1

  • blastn · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
317931 317931 PRJNA1180292_P_NODE_3221_length_381_cov_4.743506_g3089_i0 PRJNA1180292 3221 381 4.743506 18.07275786 Capillaria sp. ALS-2019 2651741 Nematoda Nematoda 276 1.98e-69   NTclustered gi|1811126246|gb|MN526255.1| 2651741 g3089 i0 99.342 40.0367454068241 152 1 57 0 1 152 1195 1044 Capillaria sp. ALS-2019 large subunit ribosomal RNA gene, partial sequence blastn 15254 276 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Capillaria Capillaria sp. ALS-2019
317959 317959 PRJNA1180292_P_NODE_601_length_907_cov_15.998801_g489_i0 PRJNA1180292 601 907 15.998801 145.10912507 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1664 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g489 i0 99.779 1.25578831312018 907 2 100 0 1 907 8041 8947 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1139 1664 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
1592518 1592518 PRJNA1180292_P_NODE_1522_length_560_cov_1.402464_g1390_i0 PRJNA1180292 1522 560 1.402464 7.8537984 Litoditis aff. marina PmIV 1656232 Nematoda Nematoda 702 0   NTclustered gi|910356144|ref|NC_027697.1| 1656232 g1390 i0 89.286 99.3125 560 60 100 0 1 560 5145 5704 Litoditis aff. marina PmIV mitochondrion, complete genome blastn 55615 702 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Litoditis Litoditis aff. marina PmIV
1592524 1592524 PRJNA1180292_P_NODE_2082_length_471_cov_1.959799_g1950_i0 PRJNA1180292 2082 471 1.959799 9.23065329 Trichinella spiralis 6334 Nematoda Nematoda 281 5.37e-71   NTclustered gi|339252409|ref|XM_003371380.1| 6334 g1950 i0 81.268 0.815286624203822 347 65 74 0 119 465 1 347 Trichinella spiralis troponin C, isoform 2 (Tsp_11636) mRNA, complete cds blastn 384 281 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
4144789 4144789 PRJNA1180292_P_NODE_4204_length_337_cov_1.181818_g4072_i0 PRJNA1180292 4204 337 1.181818 3.98272666 Trichinella pseudospiralis 6337 Nematoda Nematoda 215 3.83e-51   NTclustered gi|17646750|gb|AF453521.1|AF453521 6337 g4072 i0 83.262 4.17507418397626 233 39 69 0 94 326 1 233 Trichinella pseudospiralis tropomyosin mRNA, complete cds blastn 1407 215 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
4144813 4144813 PRJNA1180292_P_NODE_6684_length_272_cov_2.743719_g6552_i0 PRJNA1180292 6684 272 2.743719 7.46291568 Caenorhabditis elegans 6239 Nematoda Nematoda 156 1.85e-33   NTclustered gi|1734332372|ref|NM_070393.5| 6239 g6552 i0 81.25 16.5661764705882 192 36 71 0 47 238 215 24 Caenorhabditis elegans Small ribosomal subunit protein uS13 (rps-18), mRNA blastn 4506 156 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
5420904 5420904 PRJNA1180292_P_NODE_10365_length_248_cov_0.891429_g10233_i0 PRJNA1180292 10365 248 0.891429 2.21074392 Caenorhabditis briggsae 6238 Nematoda Nematoda 158 4.62e-34   NTclustered gi|268570235|ref|XM_002640679.1| 6238 g10233 i0 87.97 26.7822580645161 133 16 54 0 1 133 722 854 Caenorhabditis briggsae Protein CBR-LEV-11, isoform b (Cbr-lev-11), partial mRNA blastn 6642 158 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
6695748 6695748 PRJNA1180292_P_NODE_4406_length_330_cov_1.202335_g4274_i0 PRJNA1180292 4406 330 1.202335 3.9677055 Trichinella spiralis 6334 Nematoda Nematoda 148 3.8499999999999996e-31   NTclustered gi|339243730|ref|XM_003377743.1| 6334 g4274 i0 88.189 0.384848484848485 127 12 38 3 12 135 287 161 Trichinella spiralis ADP/ATP translocase 1 (Tsp_01983) mRNA, complete cds blastn 127 148 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
6695761 6695761 PRJNA1180292_P_NODE_5726_length_291_cov_1.770642_g5594_i0 PRJNA1180292 5726 291 1.770642 5.15256822 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 538 1.6999999999999994e-148   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g5594 i0 100 98.8522336769759 291 0 100 0 1 291 864 574 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 28766 538 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
6695769 6695769 PRJNA1180292_P_NODE_6386_length_278_cov_1.575610_g6254_i0 PRJNA1180292 6386 278 1.57561 4.3801958 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 507 4.54e-139   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g6254 i0 99.639 0.996402877697842 277 1 99 0 1 277 5024 5300 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 277 507 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
7971123 7971123 PRJNA1180292_P_NODE_3367_length_374_cov_0.880399_g3235_i0 PRJNA1180292 3367 374 0.880399 3.29269226 Trichinella spiralis 6334 Nematoda Nematoda 222 2.56e-53   NTclustered gi|339254651|ref|XM_003372501.1| 6334 g3235 i0 79.257 10.9919786096257 323 64 86 3 8 328 521 200 Trichinella spiralis hypothetical protein (Tsp_10306) mRNA, complete cds blastn 4111 222 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
7971129 7971129 PRJNA1180292_P_NODE_3987_length_344_cov_15.867159_g3855_i0 PRJNA1180292 3987 344 15.867159 54.58302696 Aonchotheca paranalis 2025203 Nematoda Nematoda 460 4.56e-125   NTclustered gi|1279640587|gb|MF621021.1| 2025203 g3855 i0 90.936 31.3808139534884 342 31 99 0 3 344 3555 3896 Aonchotheca paranalis isolate PL 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10795 460 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Aonchotheca Aonchotheca paranalis
9245738 9245738 PRJNA1180292_P_NODE_2408_length_438_cov_5.871233_g2276_i0 PRJNA1180292 2408 438 5.871233 25.71600054 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 763 0   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g2276 i0 99.523 87.2831050228311 419 2 96 0 3 421 419 1 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 38230 763 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
9245773 9245773 PRJNA1180292_P_NODE_5128_length_307_cov_1.670940_g4996_i0 PRJNA1180292 5128 307 1.67094 5.1297858 Anisakis pegreffii 303229 Nematoda Nematoda 261 4.37e-65   NTclustered gi|699026382|gb|KF840392.1| 303229 g4996 i0 82.237 84.7328990228013 304 52 99 2 1 303 1413 1715 Anisakis pegreffii heat shock protein 70 (hsp70) mRNA, complete cds blastn 26013 261 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis pegreffii
10521481 10521481 PRJNA1180292_P_NODE_13149_length_242_cov_0.923077_g13017_i0 PRJNA1180292 13149 242 0.923077 2.23384634 Leptojacobus dorci 1463561 Nematoda Nematoda 145 3.5e-30   NTclustered gi|675118843|gb|KJ877301.1| 1463561 g13017 i0 79.524 0.867768595041322 210 37 86 5 33 239 207 1 Leptojacobus dorci strain RS9005 large subunit ribosomal protein 2 (rpl-2) mRNA, partial cds blastn 210 145 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Leptojacobus Leptojacobus dorci
11796530 11796530 PRJNA1180292_P_NODE_730_length_815_cov_20.938005_g611_i0 PRJNA1180292 730 815 20.938005 170.64474075 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1495 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g611 i0 99.755 7.32269938650307 815 2 100 0 1 815 4127 4941 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 5968 1495 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
13071474 13071474 PRJNA1180292_P_NODE_1371_length_587_cov_1.787938_g1239_i0 PRJNA1180292 1371 587 1.787938 10.49519606 Protorhabditis sp. DF5055 96771 Nematoda Nematoda 337 1.4299999999999995e-87   NTclustered gi|48869071|gb|AY602168.1| 96771 g1239 i0 82.195 39.6848381601363 410 56 69 16 122 524 33 432 Protorhabditis sp. DF5055 28S large subunit ribosomal RNA gene, partial sequence blastn 23295 337 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Protorhabditis Protorhabditis sp. DF5055
14346910 14346910 PRJNA1180292_P_NODE_472_length_1037_cov_34.149378_g374_i0 PRJNA1180292 472 1037 34.149378 354.12904986 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1910 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g374 i0 99.904 38.6875602700096 1037 1 100 0 1 1037 1478 442 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 40119 1910 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
15620597 15620597 PRJNA1180292_P_NODE_1033_length_686_cov_34.176183_g902_i0 PRJNA1180292 1033 686 34.176183 234.44861538 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1256 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g902 i0 99.708 2.13411078717201 686 2 100 0 1 686 7199 7884 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1464 1256 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
15620619 15620619 PRJNA1180292_P_NODE_1233_length_622_cov_1.763206_g1101_i0 PRJNA1180292 1233 622 1.763206 10.96714132 Protorhabditis sp. DF5055 96771 Nematoda Nematoda 787 0   NTclustered gi|48869071|gb|AY602168.1| 96771 g1101 i0 89.567 99.6479099678457 623 62 99 3 2 622 1920 1299 Protorhabditis sp. DF5055 28S large subunit ribosomal RNA gene, partial sequence blastn 61981 787 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Protorhabditis Protorhabditis sp. DF5055
16895006 16895006 PRJNA1180292_P_NODE_614_length_900_cov_237.972189_g499_i0 PRJNA1180292 614 900 237.972189 2141.749701 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1655 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g499 i0 99.889 51.2266666666667 899 1 99 0 1 899 2379 3277 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 46104 1655 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
18169505 18169505 PRJNA1180292_P_NODE_3475_length_367_cov_2.731293_g3343_i0 PRJNA1180292 3475 367 2.731293 10.02384531 Heterorhabditis marelatus 52064 Nematoda Nematoda 438 2.289999999999999e-118   NTclustered gi|117372743|gb|EF043419.1| 52064 g3343 i0 88.43 93.0190735694823 363 42 99 0 1 363 102 464 Heterorhabditis marelatus cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 34138 438 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heterorhabditidae Heterorhabditis Heterorhabditis marelatus
19443846 19443846 PRJNA1180292_P_NODE_3076_length_390_cov_1.362776_g2944_i0 PRJNA1180292 3076 390 1.362776 5.3148264 Necator americanus 51031 Nematoda Nematoda 100 1.31e-16   NTclustered gi|2707586448|ref|XM_064199270.1| 51031 g2944 i0 90.667 1.48461538461538 75 7 19 0 13 87 903 829 Necator americanus uncharacterized protein (RB195_002153), partial mRNA blastn 579 100 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
20719167 20719167 PRJNA1180292_P_NODE_11037_length_246_cov_0.901734_g10905_i0 PRJNA1180292 11037 246 0.901734 2.21826564 Fictor sp. 2 VS-2014 1538695 Nematoda Nematoda 235 2.06e-57   NTclustered gi|675118979|gb|KJ877369.1| 1538695 g10905 i0 84.388 16.6463414634146 237 37 96 0 5 241 264 28 Fictor sp. 2 VS-2014 strain RS9002 large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 4095 235 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Fictor Fictor sp. 2 VS-2014
20719202 20719202 PRJNA1180292_P_NODE_177_length_1533_cov_75.284247_g118_i0 PRJNA1180292 177 1533 75.284247 1154.10750651 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2832 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g118 i0 100 52.7227658186562 1533 0 100 0 1 1533 7177 5645 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 80824 2832 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
20719229 20719229 PRJNA1180292_P_NODE_517_length_995_cov_11.309111_g414_i0 PRJNA1180292 517 995 11.309111 112.52565445 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1838 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g414 i0 100 4.77185929648241 995 0 100 0 1 995 13102 12108 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 4748 1838 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
20719241 20719241 PRJNA1180292_P_NODE_6057_length_285_cov_0.867925_g5925_i0 PRJNA1180292 6057 285 0.867925 2.47358625 Protorhabditis sp. 1 GVDU-2019 2590371 Nematoda Nematoda 520 6e-143   NTclustered gi|1689836177|gb|MN082348.1| 2590371 g5925 i0 99.648 5.82105263157895 284 1 99 0 1 284 457 740 Protorhabditis sp. 1 GVDU-2019 small subunit ribosomal RNA gene, partial sequence blastn 1659 520 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Protorhabditis Protorhabditis sp. 1 GVDU-2019
20719247 20719247 PRJNA1180292_P_NODE_6437_length_277_cov_1.529412_g6305_i0 PRJNA1180292 6437 277 1.529412 4.23647124 Nematoda environmental sample 554024 Nematoda Nematoda 353 6.24e-93   NTclustered gi|433364451|dbj|AB728473.1| 554024 g6305 i0 90.146 97.6678700361011 274 23 98 3 4 275 323 52 Nematoda environmental sample mitochondrial COI gene for cytochrome oxidase subunit I, partial cds, isolate: SnTUT_h01_19, operational taxonomic unit: H01cOTU13 blastn 27054 353 1 Eukaryota Opisthokonta Metazoa Nematoda         Nematoda environmental sample
21994521 21994521 PRJNA1180292_P_NODE_1518_length_560_cov_5.669405_g1386_i0 PRJNA1180292 1518 560 5.669405 31.748668 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1018 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g1386 i0 99.464 1 560 3 100 0 1 560 10131 9572 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 560 1018 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
23269981 23269981 PRJNA1180292_P_NODE_1099_length_666_cov_9.222597_g968_i0 PRJNA1180292 1099 666 9.222597 61.42249602 Capillaria sp. ALS-2019 2651741 Nematoda Nematoda 178 1.05e-39   NTclustered gi|1811126246|gb|MN526255.1| 2651741 g968 i0 91.538 51.0705705705706 130 10 19 1 538 666 343 214 Capillaria sp. ALS-2019 large subunit ribosomal RNA gene, partial sequence blastn 34013 178 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Capillaria Capillaria sp. ALS-2019
23270087 23270087 PRJNA1180292_P_NODE_939_length_723_cov_4.221538_g812_i0 PRJNA1180292 939 723 4.221538 30.52171974 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1314 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g812 i0 99.447 2.17427385892116 723 4 100 0 1 723 10747 11469 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1572 1314 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;