RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1180292" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1180292 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4869323 4869323 PRJNA1180292_P_NODE_12964_length_242_cov_0.923077_g12832_i0 PRJNA1180292 12964 242 0.923077 2.23384634 Glugea 36736 Fungi Fungi 327 3.23e-85   NTclustered gi|562115|gb|U15987.1|GAU15987 36737 g12832 i0 91.057 100.904958677686 246 17 100 5 1 242 262 18 Glugea atherinae small subunit ribosomal RNA gene blastn 24419 327 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Glugea Glugea atherinae
10521487 10521487 PRJNA1180292_P_NODE_189_length_1499_cov_11.812062_g124_i0 PRJNA1180292 189 1499 11.812062 177.06280938 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 1609 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g124 i0 89.609 77.6804536357572 1280 114 85 15 7 1274 1273 1 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 116443 1609 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
20167583 20167583 PRJNA1180292_P_NODE_4256_length_335_cov_1.488550_g4124_i0 PRJNA1180292 4256 335 1.48855 4.9866425 Pleistophoridae 35232 Fungi Fungi 407 5.849999999999999e-109   NTclustered gi|134147422|gb|EF119339.1| 249366 g4124 i0 88.529 25.0089552238806 340 34 100 3 1 335 2434 2095 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 8378 411 0.990267639902676 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
22718141 22718141 PRJNA1180292_P_NODE_2938_length_399_cov_1.429448_g2806_i0 PRJNA1180292 2938 399 1.429448 5.70349752 Eukaryota 2759 Fungi Fungi 375 2e-99   NTclustered gi|134147422|gb|EF119339.1| 249366 g2806 i0 83.744 101.563909774436 406 52 99 11 1 396 1374 1775 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 40524 377 0.994694960212202 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
23270014 23270014 PRJNA1180292_P_NODE_139_length_1658_cov_6.585489_g91_i0 PRJNA1180292 139 1658 6.585489 109.18740762 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 741 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g91 i0 84.873 13.3449939686369 747 99 92 14 902 1641 2468 1729 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22126 741 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
24543796 24543796 PRJNA1180292_P_NODE_1060_length_676_cov_2.109453_g929_i0 PRJNA1180292 1060 676 2.109453 14.25990228 Fusasporis stethaprioni 2777717 Fungi Fungi 1051 0   NTclustered gi|1914073495|gb|MW077214.1| 2777717 g929 i0 94.698 100.622781065089 679 33 100 2 1 676 233 911 Fusasporis stethaprioni strain 2018 small subunit ribosomal RNA gene, partial sequence blastn 68021 1051 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Fusasporis Fusasporis stethaprioni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;