RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1180292" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1180292 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
317984 317984 PRJNA1180292_P_NODE_8141_length_253_cov_0.866667_g8009_i0 PRJNA1180292 8141 253 0.866667 2.19266751 Anaerolineales bacterium 2073117 Bacteria Bacteria 134 7.970000000000001e-27   NTclustered gi|2556899361|gb|CP129481.1| 2073117 g8009 i0 86.885 1.24505928853755 122 12 47 2 100 218 3383095 3382975 MAG: Anaerolineales bacterium isolate cMAG.15 chromosome, complete genome blastn 315 134 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
11796452 11796452 PRJNA1180292_P_NODE_12270_length_244_cov_0.871345_g12138_i0 PRJNA1180292 12270 244 0.871345 2.1260818 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 222 1.59e-53   NTclustered gi|2874253766|emb|OY969711.1| 1672391 g12138 i0 83.468 5.33606557377049 248 31 98 9 5 244 681911 681666 MAG: uncultured Chloroflexia bacterium isolate MFD09730.bin.c.1 genome assembly, chromosome: 1 blastn 1302 222 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
11796543 11796543 PRJNA1180292_P_NODE_8630_length_252_cov_0.871508_g8498_i0 PRJNA1180292 8630 252 0.871508 2.19620016 Anaerolineales bacterium 2073117 Bacteria Bacteria 195 3.59e-45   NTclustered gi|2556895010|gb|CP129480.1| 2073117 g8498 i0 83.824 51.234126984127 204 33 81 0 4 207 2665453 2665656 MAG: Anaerolineales bacterium isolate cMAG.16 chromosome, complete genome blastn 12911 195 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
19443793 19443793 PRJNA1180292_P_NODE_10136_length_248_cov_0.891429_g10004_i0 PRJNA1180292 10136 248 0.891429 2.21074392 uncultured Caldilineaceae bacterium 543031 Bacteria Bacteria 241 4.46e-59   NTclustered gi|2531946084|emb|OY282381.1| 543031 g10004 i0 84.774 3.45967741935484 243 34 98 3 3 244 819703 819943 MAG: uncultured Caldilineaceae bacterium genome assembly, chromosome: 1 blastn 858 241 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   uncultured Caldilineaceae bacterium
23270052 23270052 PRJNA1180292_P_NODE_6759_length_271_cov_1.368687_g6627_i0 PRJNA1180292 6759 271 1.368687 3.70914177 Anaerolineales bacterium 2073117 Bacteria Bacteria 248 2.95e-61   NTclustered gi|2556895010|gb|CP129480.1| 2073117 g6627 i0 83.774 1.23247232472325 265 39 97 4 1 263 4101822 4102084 MAG: Anaerolineales bacterium isolate cMAG.16 chromosome, complete genome blastn 334 248 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
24543826 24543826 PRJNA1180292_P_NODE_12980_length_242_cov_0.923077_g12848_i0 PRJNA1180292 12980 242 0.923077 2.23384634 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 152 2.0899999999999998e-32   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g12848 i0 84.076 47.9132231404959 157 25 65 0 19 175 1067347 1067191 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 11595 152 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;