RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1180292" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA1180292 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7971056 7971056 PRJNA1180292_P_NODE_10107_length_248_cov_0.891429_g9975_i0 PRJNA1180292 10107 248 0.891429 2.21074392 Methanolobus sediminis 3072978 Archaea Archaea 353 5.49e-93   NTclustered gi|2575181144|gb|CP133592.1| 3072978 g9975 i0 92.653 0.987903225806452 245 18 99 0 1 245 1669867 1670111 Methanolobus sediminis strain FTZ6 chromosome, complete genome blastn 245 353 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sediminis
15620610 15620610 PRJNA1180292_P_NODE_11693_length_245_cov_0.906977_g11561_i0 PRJNA1180292 11693 245 0.906977 2.22209365 Methanoregula sp. 2052170 Archaea Archaea 187 5.809999999999998e-43   NTclustered gi|2381065543|gb|CP112999.1| 2052170 g11561 i0 82.273 0.897959183673469 220 35 89 2 28 245 1234947 1235164 MAG: Methanoregula sp. isolate DGG0 chromosome, complete genome blastn 220 187 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;