contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1175041" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5420677 | 5420677 | PRJNA1175041_P_NODE_98305_length_248_cov_0.868571_g95437_i0 | PRJNA1175041 | 98305 | 248 | 0.868571 | 2.15405608 | Corynebacterium hadale | 2026255 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2537331151|gb|CP047655.1| | 2026255 | g95437 | i0 | 100 | 385.064516129032 | 248 | 0 | 100 | 0 | 1 | 248 | 1273267 | 1273514 | Corynebacterium hadale strain DSM 105365 chromosome, complete genome | blastn | 95496 | 459 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium hadale | ||
| 8694045 | 8694045 | PRJNA1175041_P_NODE_46807_length_467_cov_1.446701_g43941_i0 | PRJNA1175041 | 46807 | 467 | 1.446701 | 6.75609367 | Corynebacterium | 1716 | Bacteria | Bacteria | 841 | 0 | NTclustered | gi|2547420364|gb|CP073093.1| | 38304 | g43941 | i0 | 99.355 | 366.758029978587 | 465 | 1 | 99 | 1 | 1 | 465 | 293904 | 294366 | Corynebacterium tuberculostearicum strain CTNIH12 chromosome, complete genome | blastn | 171276 | 841 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium tuberculostearicum | ||
| 9245502 | 9245502 | PRJNA1175041_P_NODE_99028_length_247_cov_0.873563_g96160_i0 | PRJNA1175041 | 99028 | 247 | 0.873563 | 2.15770061 | Schaalia odontolytica | 1660 | Bacteria | Bacteria | 124 | 4.66e-24 | NTclustered | gi|1663040979|gb|CP040006.1| | 1660 | g96160 | i0 | 98.571 | 0.283400809716599 | 70 | 1 | 28 | 0 | 1 | 70 | 1127189 | 1127258 | Schaalia odontolytica strain XH001 chromosome, complete genome | blastn | 70 | 124 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Schaalia | Schaalia odontolytica | ||
| 9969264 | 9969264 | PRJNA1175041_P_NODE_99408_length_247_cov_0.862069_g96540_i0 | PRJNA1175041 | 99408 | 247 | 0.862069 | 2.12931043 | Bifidobacterium | 1678 | Bacteria | Bacteria | 451 | 1.88e-122 | NTclustered | gi|2450724931|gb|CP118598.1| | 1679 | g96540 | i0 | 99.595 | 8 | 247 | 1 | 100 | 0 | 1 | 247 | 1222869 | 1223115 | Bifidobacterium longum subsp. longum strain F2 chromosome, complete genome | blastn | 1976 | 451 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | Bifidobacterium longum | ||
| 13794446 | 13794446 | PRJNA1175041_P_NODE_96051_length_250_cov_1.000000_g93183_i0 | PRJNA1175041 | 96051 | 250 | 1 | 2.5 | Geodermatophilaceae | 85030 | Bacteria | Bacteria | 302 | 2.04e-77 | NTclustered | gi|507148190|ref|NR_102997.1| | 138336 | g93183 | i0 | 88.538 | 241.064 | 253 | 24 | 100 | 5 | 1 | 250 | 1652 | 1402 | Blastococcus saxobsidens strain DD2 23S ribosomal RNA gene, complete sequence | blastn | 60266 | 303 | 0.996699669966997 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Geodermatophilales | Geodermatophilaceae | Blastococcus | Blastococcus saxobsidens | ||
| 14346520 | 14346520 | PRJNA1175041_P_NODE_90452_length_265_cov_0.973958_g87584_i0 | PRJNA1175041 | 90452 | 265 | 0.973958 | 2.5809887 | Corynebacterium gottingense | 2041036 | Bacteria | Bacteria | 484 | 2.0199999999999998e-132 | NTclustered | gi|2869851930|gb|CP175790.1| | 2041036 | g87584 | i0 | 99.623 | 362.581132075472 | 265 | 1 | 100 | 0 | 1 | 265 | 244019 | 244283 | Corynebacterium gottingense strain YSMAA1_1_F6 chromosome, complete genome | blastn | 96084 | 484 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium gottingense | ||
| 16893568 | 16893568 | PRJNA1175041_P_NODE_105694_length_241_cov_0.904762_g102826_i0 | PRJNA1175041 | 105694 | 241 | 0.904762 | 2.18047642 | Streptomyces sp. 11x1 | 3038642 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2591930018|gb|CP122458.1| | 3038642 | g102826 | i0 | 96.875 | 0.132780082987552 | 32 | 0 | 13 | 1 | 91 | 122 | 5456664 | 5456634 | Streptomyces sp. 11x1 chromosome, complete genome | blastn | 32 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. 11x1 | ||
| 22718040 | 22718040 | PRJNA1175041_P_NODE_79638_length_295_cov_1.063063_g76770_i0 | PRJNA1175041 | 79638 | 295 | 1.063063 | 3.13603585 | Corynebacterium | 1716 | Bacteria | Bacteria | 512 | 1.04e-140 | NTclustered | gi|2537331151|gb|CP047655.1| | 2026255 | g76770 | i0 | 97.966 | 433.840677966102 | 295 | 6 | 100 | 0 | 1 | 295 | 735100 | 735394 | Corynebacterium hadale strain DSM 105365 chromosome, complete genome | blastn | 127983 | 512 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium hadale | ||
| 22718041 | 22718041 | PRJNA1175041_P_NODE_79918_length_294_cov_1.262443_g77050_i0 | PRJNA1175041 | 79918 | 294 | 1.262443 | 3.71158242 | Corynebacterium | 1716 | Bacteria | Bacteria | 514 | 2.8899999999999997e-141 | NTclustered | gi|2869815348|gb|CP175785.1| | 1979527 | g77050 | i0 | 98.299 | 370.585034013605 | 294 | 3 | 100 | 2 | 1 | 294 | 545944 | 546235 | Corynebacterium kefirresidentii strain YSMAA1_2_B7 chromosome, complete genome | blastn | 108952 | 514 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kefirresidentii | ||
| 22718057 | 22718057 | PRJNA1175041_P_NODE_99958_length_246_cov_0.878613_g97090_i0 | PRJNA1175041 | 99958 | 246 | 0.878613 | 2.16138798 | Corynebacterium | 1716 | Bacteria | Bacteria | 416 | 6.839999999999999e-112 | NTclustered | gi|2537331151|gb|CP047655.1| | 2026255 | g97090 | i0 | 97.154 | 4.00813008130081 | 246 | 7 | 100 | 0 | 1 | 246 | 17556 | 17311 | Corynebacterium hadale strain DSM 105365 chromosome, complete genome | blastn | 986 | 416 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium hadale |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;