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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1174234" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA1174234 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
316272 316272 PRJNA1174234_P_NODE_6641_length_529_cov_1.758772_g6445_i0 PRJNA1174234 6641 529 1.758772 9.30390388 Escherichia virus KFS-EC3 2836074 Viruses Viruses 60.2 3.1e-4   NTclustered gi|2045607952|gb|MZ065353.1| 2836074 g6445 i0 97.143 0.130434782608696 35 1 7 0 260 294 127645 127611 Escherichia virus KFS-EC3, complete genome blastn 69 60.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Straboviridae Tequatrovirus Escherichia virus KFS-EC3
2866876 2866876 PRJNA1174234_P_NODE_13223_length_378_cov_3.331148_g13027_i0 PRJNA1174234 13223 378 3.331148 12.59173944 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.036   NTclustered gi|2056962135|tpg|BK022939.1| 2832643 g13027 i0 100 0.148148148148148 28 0 7 0 214 241 7338 7365 MAG TPA_asm: Caudoviricetes sp. isolate ctDW64, partial genome blastn 56 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
2866943 2866943 PRJNA1174234_P_NODE_21823_length_295_cov_87.283784_g21627_i0 PRJNA1174234 21823 295 87.283784 257.4871628 Mitovirus sp. 2587224 Viruses Viruses 174 5.6e-39   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g21627 i0 94.643 3.18305084745763 112 6 38 0 8 119 1 112 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 939 174 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
6694022 6694022 PRJNA1174234_P_NODE_19706_length_311_cov_1.109244_g19510_i0 PRJNA1174234 19706 311 1.109244 3.44974884 Bandra megavirus 2071566 Viruses Viruses 54.7 0.008   NTclustered gi|1336444313|gb|MG779343.1| 2071566 g19510 i0 92.308 0.665594855305466 39 1 13 1 17 55 903 867 Bandra megavirus isolate KK-1 genomic sequence blastn 207 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Megavirus Bandra megavirus
18892463 18892463 PRJNA1174234_P_NODE_21695_length_296_cov_1.721973_g21499_i0 PRJNA1174234 21695 296 1.721973 5.09704008 root 1 Root_unresolved Root_unresolved 54.7 0.008   NTclustered gi|769793965|gb|KM082124.1| 11676 g21499 i0 100 3.45945945945946 29 0 10 0 42 70 769 741 HIV-1 isolate 1906CDNAPBMC21OCT2009.P3F9 from USA vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds blastn 1024 54.7 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Lentivirus Lentivirus humimdef1
23268348 23268348 PRJNA1174234_P_NODE_30379_length_249_cov_0.875000_g30183_i0 PRJNA1174234 30379 249 0.875 2.17875 Zebrafish picornavirus 1 2304617 Viruses Viruses 409 1.16e-109   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g30183 i0 96.735 2.95180722891566 245 8 98 0 5 249 6404 6160 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 735 409 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24542072 24542072 PRJNA1174234_P_NODE_21540_length_297_cov_4.562500_g21344_i0 PRJNA1174234 21540 297 4.5625 13.550625 Burkholderia phage BCSR5 2805747 Viruses Viruses 67.6 9.85e-7   NTclustered gi|1971775256|gb|MW460245.1| 2805747 g21344 i0 100 0.508417508417508 36 0 12 0 140 175 654 619 Burkholderia phage BCSR5, complete genome blastn 151 67.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Burkholderia phage BCSR5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;