contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA1174234" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4143036 | 4143036 | PRJNA1174234_P_NODE_2624_length_794_cov_3.194175_g2456_i0 | PRJNA1174234 | 2624 | 794 | 3.194175 | 25.3617495 | Nannocystis punicea | 2995304 | Bacteria | Bacteria | 357 | 1.51e-93 | NTclustered | gi|2415023655|gb|CP114040.1| | 2995304 | g2456 | i0 | 82.367 | 52.1448362720403 | 431 | 56 | 54 | 14 | 34 | 459 | 5377565 | 5377150 | Nannocystis poenicansa strain FL3 chromosome, complete genome | blastn | 41403 | 357 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis punicea | |||
| 8693900 | 8693900 | PRJNA1174234_P_NODE_26007_length_269_cov_1.178571_g25811_i0 | PRJNA1174234 | 26007 | 269 | 1.178571 | 3.17035599 | Corallococcus | 83461 | Bacteria | Bacteria | 497 | 2.63e-136 | NTclustered | gi|1561763003|gb|CP034669.1| | 184914 | g25811 | i0 | 100 | 240.921933085502 | 269 | 0 | 100 | 0 | 1 | 269 | 144314 | 144046 | Corallococcus coralloides strain B035 chromosome, complete genome | blastn | 64808 | 497 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus coralloides | ||
| 12519616 | 12519616 | PRJNA1174234_P_NODE_33290_length_245_cov_0.877907_g33094_i0 | PRJNA1174234 | 33290 | 245 | 0.877907 | 2.15087215 | Myxococcus | 32 | Bacteria | Bacteria | 135 | 2.13e-27 | NTclustered | gi|2869653495|gb|CP175551.1| | 33 | g33094 | i0 | 88.393 | 13.7183673469388 | 112 | 13 | 46 | 0 | 131 | 242 | 8711847 | 8711736 | Myxococcus fulvus strain KYC1117 chromosome, complete genome | blastn | 3361 | 135 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 14345033 | 14345033 | PRJNA1174234_P_NODE_14512_length_361_cov_3.138889_g14316_i0 | PRJNA1174234 | 14512 | 361 | 3.138889 | 11.33138929 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 115 | 4.3e-21 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g14316 | i0 | 85.981 | 30.0969529085873 | 107 | 15 | 30 | 0 | 73 | 179 | 10631087 | 10630981 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 10865 | 115 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 15068625 | 15068625 | PRJNA1174234_P_NODE_2292_length_841_cov_2.667969_g2130_i0 | PRJNA1174234 | 2292 | 841 | 2.667969 | 22.43761929 | Sorangium | 39643 | Bacteria | Bacteria | 819 | 0 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g2130 | i0 | 84.271 | 123.378121284185 | 871 | 103 | 100 | 24 | 1 | 841 | 3449746 | 3448880 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 103761 | 822 | 0.996350364963504 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 16893195 | 16893195 | PRJNA1174234_P_NODE_2294_length_841_cov_2.299479_g2132_i0 | PRJNA1174234 | 2294 | 841 | 2.299479 | 19.33861839 | Chondromyces crocatus | 52 | Bacteria | Bacteria | 1037 | 0 | NTclustered | gi|908353314|gb|CP012159.1| | 52 | g2132 | i0 | 88.915 | 127.193816884661 | 848 | 85 | 100 | 8 | 1 | 841 | 1430422 | 1431267 | Chondromyces crocatus strain Cm c5, complete genome | blastn | 106970 | 1037 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 20717550 | 20717550 | PRJNA1174234_P_NODE_35837_length_241_cov_0.916667_g35641_i0 | PRJNA1174234 | 35837 | 241 | 0.916667 | 2.20916747 | Corallococcus interemptor | 2316720 | Bacteria | Bacteria | 272 | 1.5299999999999999e-68 | NTclustered | gi|2809283937|gb|CP102579.1| | 2316720 | g35641 | i0 | 88.382 | 20.4522821576763 | 241 | 9 | 100 | 9 | 1 | 241 | 6155785 | 6156006 | Corallococcus interemptor strain YZPH-2 chromosome, complete genome | blastn | 4929 | 272 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus interemptor | ||
| 20717556 | 20717556 | PRJNA1174234_P_NODE_3957_length_670_cov_1.432161_g3769_i0 | PRJNA1174234 | 3957 | 670 | 1.432161 | 9.5954787 | Archangium gephyra | 48 | Bacteria | Bacteria | 62.1 | 1.11e-4 | NTclustered | gi|2809295724|gb|CP102578.1| | 48 | g3769 | i0 | 91.304 | 0.0686567164179104 | 46 | 3 | 7 | 1 | 562 | 607 | 6450893 | 6450849 | Archangium gephyra strain SDU49 chromosome, complete genome | blastn | 46 | 62.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 23993112 | 23993112 | PRJNA1174234_P_NODE_27039_length_262_cov_1.857143_g26843_i0 | PRJNA1174234 | 27039 | 262 | 1.857143 | 4.86571466 | Stigmatella | 40 | Bacteria | Bacteria | 479 | 9.249999999999999e-131 | NTclustered | gi|343198889|ref|NR_043951.1| | 41 | g26843 | i0 | 99.618 | 112.950381679389 | 262 | 1 | 100 | 0 | 1 | 262 | 690 | 429 | Stigmatella aurantiaca strain ATCC 25190 16S ribosomal RNA, partial sequence | blastn | 29593 | 479 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;