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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1174207" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1174207 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4142779 4142779 PRJNA1174207_P_NODE_3924_length_896_cov_2.331713_g3475_i0 PRJNA1174207 3924 896 2.331713 20.89214848 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 412 3.6e-110   NTclustered gi|2874253768|emb|OY969715.1| 412056 g3475 i0 82.626 58.6082589285714 495 58 78 15 422 893 914538 915027 MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 blastn 52513 412 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
6693741 6693741 PRJNA1174207_P_NODE_3866_length_905_cov_3.895433_g3418_i0 PRJNA1174207 3866 905 3.895433 35.25366865 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 691 0   NTclustered gi|2813917447|gb|CP170506.1| 2811408 g3418 i0 80.773 246.667403314917 931 139 99 31 8 905 3049055 3048132 MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome blastn 223234 691 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
7968673 7968673 PRJNA1174207_P_NODE_15287_length_369_cov_2.391892_g14758_i0 PRJNA1174207 15287 369 2.391892 8.82608148 Pedosphaera parvula 1032527 Bacteria Bacteria 549 1.0199999999999994e-151   NTclustered gi|183579829|emb|AM905426.1| 320771 g14758 i0 94.183 135.634146341463 361 19 98 1 9 369 2251 1893 Bacterium Ellin514 23S rRNA gene, isolate Ellin514 blastn 50049 549 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera parvula
9243793 9243793 PRJNA1174207_P_NODE_40328_length_242_cov_1.822485_g39799_i0 PRJNA1174207 40328 242 1.822485 4.4104137 uncultured Verrucomicrobiota bacterium 156588 Bacteria Bacteria 370 5.3e-98   NTclustered gi|511202471|gb|KC994702.1| 156588 g39799 i0 94.239 95.7231404958678 243 12 100 2 1 242 16 257 Uncultured Verrucomicrobia bacterium clone BF 022 16S ribosomal RNA gene, partial sequence blastn 23165 370 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         uncultured Verrucomicrobiota bacterium
10519119 10519119 PRJNA1174207_P_NODE_20289_length_314_cov_3.647303_g19760_i0 PRJNA1174207 20289 314 3.647303 11.45253142 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 392 1.52e-104   NTclustered gi|2874253779|emb|OY969763.1| 412056 g19760 i0 89.164 88.0350318471338 323 23 99 7 1 312 3832284 3832605 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 blastn 27643 392 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
14344571 14344571 PRJNA1174207_P_NODE_25772_length_282_cov_2.181818_g25243_i0 PRJNA1174207 25772 282 2.181818 6.15272676 Opitutales bacterium 2026772 Bacteria Bacteria 255 1.85e-63   NTclustered gi|2891482117|emb|OZ219851.1| 2026772 g25243 i0 83.333 55.2836879432624 288 37 100 11 1 282 1410404 1410122 MAG: Opitutales bacterium isolate e4292735-b3b5-42df-bce3-ad3ef7a88f44 genome assembly, chromosome: 10 blastn 15590 255 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
19441951 19441951 PRJNA1174207_P_NODE_42956_length_229_cov_2.416667_g42427_i0 PRJNA1174207 42956 229 2.416667 5.53416743 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 353 5e-93   NTclustered gi|2874253690|emb|OY969416.1| 412056 g42427 i0 94.737 40.4148471615721 228 11 99 1 2 229 1315574 1315800 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 blastn 9255 353 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
24541783 24541783 PRJNA1174207_P_NODE_37000_length_247_cov_0.879310_g36471_i0 PRJNA1174207 37000 247 0.87931 2.1718957 Opitutus sp. GAS368 1882749 Bacteria Bacteria 429 8.83e-116   NTclustered gi|1085764882|emb|LT629735.1| 1882749 g36471 i0 97.976 124.279352226721 247 5 100 0 1 247 2834000 2833754 Opitutus sp. GAS368 genome assembly, chromosome: I blastn 30697 429 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp. GAS368

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;