RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1174207" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1174207 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13068890 13068890 PRJNA1174207_P_NODE_10211_length_477_cov_2.769802_g9685_i0 PRJNA1174207 10211 477 2.769802 13.21195554 Asplanchna brightwellii 2005548 Rotifera other_Eukaryota 340 8.849999999999999e-89   NTclustered gi|2899343712|gb|PQ788833.1| 2005548 g9685 i0 80.206 32.7211740041929 485 70 99 19 2 475 2401 1932 Asplanchna brightwellii chromosome I mitochondrion, complete sequence blastn 15608 340 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna brightwellii
19441728 19441728 PRJNA1174207_P_NODE_32696_length_253_cov_1.711111_g32167_i0 PRJNA1174207 32696 253 1.711111 4.32911083 Mytilina mucronata 360681 Rotifera other_Eukaryota 381 2.5799999999999995e-101   NTclustered gi|83285199|gb|DQ297746.1| 360681 g32167 i0 94.048 85.0158102766798 252 14 99 1 3 253 266 15 Mytilina mucronata 28S ribosomal RNA gene, partial sequence blastn 21509 381 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Mytilina Mytilina mucronata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;