RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1174207" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1174207 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7969229 7969229 PRJNA1174207_P_NODE_6007_length_680_cov_9.808896_g5496_i0 PRJNA1174207 6007 680 9.808896 66.7004928 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 1000 0   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g5496 i0 93.294 39.6205882352941 686 32 100 14 1 680 2078 1401 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 26942 1000 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
9243204 9243204 PRJNA1174207_P_NODE_1068_length_1871_cov_12.896552_g855_i0 PRJNA1174207 1068 1871 12.896552 241.29448792 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 326 1.03e-83   NTclustered gi|238617602|gb|FJ973377.1| 188950 g855 i0 75.09 26.2079102084447 835 138 50 51 877 1695 1747 967 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 49035 326 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
11794080 11794080 PRJNA1174207_P_NODE_1910_length_1380_cov_9.723030_g1602_i0 PRJNA1174207 1910 1380 9.72303 134.177814 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 2032 0   NTclustered gi|1402550476|gb|MH488762.1| 2231160 g1602 i0 93.444 24.3528985507246 1388 61 100 19 1 1380 16 1381 Rosculus sp. isolate CCAC3 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 33607 2032 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
19442025 19442025 PRJNA1174207_P_NODE_8536_length_537_cov_1.853448_g8012_i0 PRJNA1174207 8536 537 1.853448 9.95301576 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 374 9.909999999999999e-99   NTclustered gi|238617630|gb|FJ973394.1| 188950 g8012 i0 79.922 91.8733705772812 513 99 95 4 1 511 187 697 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 49336 374 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
21992539 21992539 PRJNA1174207_P_NODE_4558_length_810_cov_10.546811_g4086_i0 PRJNA1174207 4558 810 10.546811 85.4291691 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 551 6.579999999999998e-152   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g4086 i0 81.844 25.679012345679 694 90 84 28 1 682 2210 2879 Rosculus vulgaris isolate CCA sequence blastn 20800 551 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
24541628 24541628 PRJNA1174207_P_NODE_29500_length_266_cov_5.445596_g28971_i0 PRJNA1174207 29500 266 5.445596 14.48528536 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 296 1.02e-75   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g28971 i0 92.019 71.9511278195489 213 14 80 3 1 212 3659 3869 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 19139 296 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;