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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA1174207" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1174207 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2866384 2866384 PRJNA1174207_P_NODE_22943_length_296_cov_3.502242_g22414_i0 PRJNA1174207 22943 296 3.502242 10.36663632 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 540 4.81e-149   NTclustered gi|325147544|gb|HQ597525.1| 171953 g22414 i0 99.661 99.6047297297297 295 1 99 0 2 296 307 13 Uncultured Acidobacteria bacterium clone HEG_08_183 16S ribosomal RNA gene, partial sequence blastn 29483 540 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
6693194 6693194 PRJNA1174207_P_NODE_10186_length_478_cov_2.683951_g9660_i0 PRJNA1174207 10186 478 2.683951 12.82928578 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 204 1.21e-47   NTclustered gi|2874253709|emb|OY969474.1| 171953 g9660 i0 77.624 116.813807531381 362 63 74 13 22 376 3917853 3918203 MAG: uncultured Acidobacteriota bacterium isolate MFD05747.bin.1.131 genome assembly, chromosome: 1 blastn 55837 204 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
6693240 6693240 PRJNA1174207_P_NODE_13386_length_399_cov_2.073620_g12858_i0 PRJNA1174207 13386 399 2.07362 8.2737438 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 592 1.82e-164   NTclustered gi|2874253796|emb|OY969780.1| 194844 g12858 i0 93.5 157.914786967419 400 23 99 3 1 398 284788 285186 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09603.bin.c.4 genome assembly, chromosome: 1 blastn 63008 592 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
8693547 8693547 PRJNA1174207_P_NODE_25987_length_281_cov_2.288462_g25458_i0 PRJNA1174207 25987 281 2.288462 6.43057822 Acidobacteriaceae 204434 Bacteria Bacteria 453 6.08e-123   NTclustered gi|1799576755|gb|CP042596.1| 2602070 g25458 i0 95.73 122.53024911032 281 12 100 0 1 281 397657 397937 Granulicella sp. WH15 chromosome, complete genome blastn 34431 453 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella Granulicella sp. WH15
9243735 9243735 PRJNA1174207_P_NODE_37128_length_246_cov_1.780347_g36599_i0 PRJNA1174207 37128 246 1.780347 4.37965362 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 211 3.46e-50   NTclustered gi|2621701418|emb|OY760136.1| 2910147 g36599 i0 82.377 5.82520325203252 244 41 99 2 2 244 1096905 1097147 MAG: Vicinamibacterales bacterium isolate f9e760c9-8bbe-4e76-9a0a-40d6f1fb97b8 genome assembly, chromosome: 1 blastn 1433 211 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
11794415 11794415 PRJNA1174207_P_NODE_37050_length_246_cov_2.664740_g36521_i0 PRJNA1174207 37050 246 2.66474 6.5552604 Granulicella sp. 5B5 1617967 Bacteria Bacteria 455 1.4500000000000002e-123   NTclustered gi|1886125103|gb|CP046444.1| 1617967 g36521 i0 100 111.239837398374 246 0 100 0 1 246 2652647 2652892 Granulicella sp. 5B5 chromosome, complete genome blastn 27365 455 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella Granulicella sp. 5B5
13069014 13069014 PRJNA1174207_P_NODE_17151_length_345_cov_1.128676_g16622_i0 PRJNA1174207 17151 345 1.128676 3.8939322 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 390 6.089999999999999e-104   NTclustered gi|2874253692|emb|OY969418.1| 171953 g16622 i0 96.983 106.330434782609 232 7 100 0 114 345 4233672 4233441 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 36684 390 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
15618658 15618658 PRJNA1174207_P_NODE_42173_length_236_cov_4.797546_g41644_i0 PRJNA1174207 42173 236 4.797546 11.32220856 Acidobacteriota bacterium 1978231 Bacteria Bacteria 355 1.44e-93   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g41644 i0 94.372 186.71186440678 231 13 98 0 1 231 3301045 3300815 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 44064 355 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
18167591 18167591 PRJNA1174207_P_NODE_7455_length_591_cov_2.191120_g6934_i0 PRJNA1174207 7455 591 2.19112 12.9495192 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 1064 0   NTclustered gi|2874254057|emb|OY970381.1| 194844 g6934 i0 99.154 101.485617597293 591 5 100 0 1 591 1657024 1656434 MAG: uncultured Acidobacteriaceae bacterium isolate MFD04580.bin.1.19 genome assembly, chromosome: 1 blastn 59978 1064 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
19441621 19441621 PRJNA1174207_P_NODE_27216_length_276_cov_1.719212_g26687_i0 PRJNA1174207 27216 276 1.719212 4.74502512 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 143 1.46e-29   NTclustered gi|2874254108|emb|OY970193.1| 171953 g26687 i0 80.402 35.9347826086956 199 30 71 7 47 242 6748566 6748374 MAG: uncultured Acidobacteriota bacterium isolate MFD09206.bin.1.42 genome assembly, chromosome: 1 blastn 9918 143 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
21992529 21992529 PRJNA1174207_P_NODE_43478_length_217_cov_5.763889_g42949_i0 PRJNA1174207 43478 217 5.763889 12.50763913 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 335 1.7e-87   NTclustered gi|76574288|gb|DQ139436.1| 171953 g42949 i0 94.47 60.7235023041475 217 12 100 0 1 217 11 227 Uncultured Acidobacteria bacterium clone CAL6 23S ribosomal RNA gene, partial sequence blastn 13177 335 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
24541582 24541582 PRJNA1174207_P_NODE_26680_length_278_cov_3.312195_g26151_i0 PRJNA1174207 26680 278 3.312195 9.2079021 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 497 2.73e-136   NTclustered gi|2874254057|emb|OY970381.1| 194844 g26151 i0 98.921 161.392086330935 278 3 100 0 1 278 1654453 1654730 MAG: uncultured Acidobacteriaceae bacterium isolate MFD04580.bin.1.19 genome assembly, chromosome: 1 blastn 44867 497 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
24541910 24541910 PRJNA1174207_P_NODE_43560_length_213_cov_4.221429_g43031_i0 PRJNA1174207 43560 213 4.221429 8.99164377 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 274 3.67e-69   NTclustered gi|112980869|gb|DQ829673.1| 171953 g43031 i0 90.385 91.0093896713615 208 20 98 0 1 208 30 237 Uncultured Acidobacteria bacterium clone DON19 23S ribosomal RNA gene, partial sequence blastn 19385 274 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;