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contig_metadata

33 rows where analysis = "blastn", bioproject = "PRJNA1174207" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 33 ✖

bioproject 1

  • PRJNA1174207 · 33 ✖

analysis 1

  • blastn · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
315922 315922 PRJNA1174207_P_NODE_39201_length_244_cov_0.900585_g38672_i0 PRJNA1174207 39201 244 0.900585 2.1974274 Erysiphe necator associated totivirus 8 2737098 Viruses Viruses 196 9.61e-46   NTclustered gi|2396038756|gb|ON812658.1| 2737098 g38672 i0 81.148 2.00819672131148 244 46 100 0 1 244 2537 2294 MAG: Erysiphe necator associated totivirus 8 isolate TIGMIC_1, complete genome blastn 490 196 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Erysiphe necator associated totivirus 8
1040785 1040785 PRJNA1174207_P_NODE_43381_length_223_cov_4.086667_g42852_i0 PRJNA1174207 43381 223 4.086667 9.11326741 Tobamovirus 12234 Viruses Viruses 411 2.84e-110   NTclustered gi|2647550519|gb|OR843964.1| 12242 g42852 i0 100 99.5515695067265 222 0 99 0 1 222 2340 2561 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 22200 411 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
1590053 1590053 PRJNA1174207_P_NODE_14702_length_378_cov_2.026230_g14173_i0 PRJNA1174207 14702 378 2.02623 7.6591494 Varroa picorna-like virus 2873563 Viruses Viruses 366 1.1299999999999996e-96   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g14173 i0 84.392 1 378 54 99 5 2 378 841 468 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 378 366 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus
1590134 1590134 PRJNA1174207_P_NODE_19242_length_323_cov_2.208000_g18713_i0 PRJNA1174207 19242 323 2.208 7.13184 Varroa picorna-like virus 2873563 Viruses Viruses 560 4.08e-155   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g18713 i0 98.131 1.98761609907121 321 6 99 0 3 323 5484 5164 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 642 560 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus
2315956 2315956 PRJNA1174207_P_NODE_32482_length_254_cov_1.701657_g31953_i0 PRJNA1174207 32482 254 1.701657 4.32220878 Tobamovirus 12234 Viruses Viruses 470 5.37e-128   NTclustered gi|2647550519|gb|OR843964.1| 12242 g31953 i0 100 100 254 0 100 0 1 254 1567 1820 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 25400 470 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
2316205 2316205 PRJNA1174207_P_NODE_9902_length_487_cov_2.202899_g9376_i0 PRJNA1174207 9902 487 2.202899 10.72811813 Tobamovirus 12234 Viruses Viruses 893 0   NTclustered gi|1805995756|gb|MN882044.1| 1761477 g9376 i0 99.794 99.7946611909651 486 1 99 0 2 487 6323 5838 Tomato brown rugose fruit virus isolate 39563388_A, complete genome blastn 48600 893 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
3591183 3591183 PRJNA1174207_P_NODE_3763_length_921_cov_3.476415_g3323_i0 PRJNA1174207 3763 921 3.476415 32.01778215 Alphavirus 11019 Viruses Viruses 1696 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g3323 i0 99.891 99.9978284473398 921 1 100 0 1 921 4931 5851 Getah virus strain M1, complete genome blastn 92098 1701 0.997060552616108 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
3591243 3591243 PRJNA1174207_P_NODE_42983_length_228_cov_3.432258_g42454_i0 PRJNA1174207 42983 228 3.432258 7.82554824 Tobamovirus 12234 Viruses Viruses 422 1.34e-113   NTclustered gi|2701262864|gb|PP481220.1| 12253 g42454 i0 100 100 228 0 100 0 1 228 3109 3336 Tomato mosaic virus isolate INIFAP JM3, complete genome blastn 22800 422 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
3591376 3591376 PRJNA1174207_P_NODE_983_length_1940_cov_5.472951_g793_i0 PRJNA1174207 983 1940 5.472951 106.1752494 Alphavirus 11019 Viruses Viruses 3572 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g793 i0 99.897 100.148453608247 1940 2 100 0 1 1940 5890 7829 Getah virus strain M1, complete genome blastn 194288 3572 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
4868967 4868967 PRJNA1174207_P_NODE_9744_length_492_cov_1.439141_g9218_i0 PRJNA1174207 9744 492 1.439141 7.08057372 Viruses 10239 Viruses Viruses 749 0   NTclustered gi|2756423860|gb|PP745721.1| 1955144 g9218 i0 94.106 2 492 29 100 0 1 492 2717 3208 MAG: Dicistroviridae sp. isolate 017_5547 genomic sequence blastn 984 749 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
6143296 6143296 PRJNA1174207_P_NODE_15385_length_368_cov_1.345763_g14856_i0 PRJNA1174207 15385 368 1.345763 4.95240784 Tobamovirus 12234 Viruses Viruses 675 0   NTclustered gi|2701262864|gb|PP481220.1| 12253 g14856 i0 99.728 98.991847826087 368 1 100 0 1 368 4782 4415 Tomato mosaic virus isolate INIFAP JM3, complete genome blastn 36429 680 0.992647058823529 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
6143458 6143458 PRJNA1174207_P_NODE_25945_length_281_cov_4.389423_g25416_i0 PRJNA1174207 25945 281 4.389423 12.33427863 Tobamovirus 12234 Viruses Viruses 520 5.909999999999999e-143   NTclustered gi|2647550519|gb|OR843964.1| 12242 g25416 i0 100 100 281 0 100 0 1 281 2227 1947 Tobacco mosaic virus strain MR644-18E/3430 nonstructural polyprotein p183, nonstructural polyprotein p126, and movement protein genes, partial cds blastn 28100 520 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
6693372 6693372 PRJNA1174207_P_NODE_20226_length_315_cov_1.586777_g19697_i0 PRJNA1174207 20226 315 1.586777 4.99834755 Varroa picorna-like virus 2873563 Viruses Viruses 494 4.08e-135   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g19697 i0 94.921 2 315 16 100 0 1 315 3389 3075 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 630 494 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus
9243223 9243223 PRJNA1174207_P_NODE_11528_length_440_cov_2.833787_g11001_i0 PRJNA1174207 11528 440 2.833787 12.4686628 Dicistroviridae sp. 1955144 Viruses Viruses 488 2.7399999999999993e-133   NTclustered gi|2756423860|gb|PP745721.1| 1955144 g11001 i0 87.215 1.99090909090909 438 44 98 9 2 433 1794 2225 MAG: Dicistroviridae sp. isolate 017_5547 genomic sequence blastn 876 488 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
10519623 10519623 PRJNA1174207_P_NODE_809_length_2121_cov_42.583008_g640_i0 PRJNA1174207 809 2121 42.583008 903.18559968 Dicistroviridae sp. 1955144 Viruses Viruses 3217 0   NTclustered gi|2756423860|gb|PP745721.1| 1955144 g640 i0 96.368 1.89297501178689 1955 71 92 0 2 1956 3161 5115 MAG: Dicistroviridae sp. isolate 017_5547 genomic sequence blastn 4015 3217 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
11243714 11243714 PRJNA1174207_P_NODE_15229_length_370_cov_1.821549_g14700_i0 PRJNA1174207 15229 370 1.821549 6.7397313 Tobamovirus 12234 Viruses Viruses 673 0   NTclustered gi|2201440261|gb|OL652662.1| 12253 g14700 i0 99.459 100 370 2 100 0 1 370 5394 5763 Tomato mosaic virus isolate NVWA36783860, complete genome blastn 37000 673 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
11244120 11244120 PRJNA1174207_P_NODE_609_length_2460_cov_4.854629_g475_i0 PRJNA1174207 609 2460 4.854629 119.4238734 Alphavirus 11019 Viruses Viruses 4521 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g475 i0 99.837 99.8642276422764 2460 4 100 0 1 2460 11369 8910 Getah virus strain M1, complete genome blastn 245666 4538 0.996253856324372 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
13069023 13069023 PRJNA1174207_P_NODE_17851_length_337_cov_1.598485_g17322_i0 PRJNA1174207 17851 337 1.598485 5.38689445 brine shrimp arlivirus 7 2900382 Viruses Viruses 617 2.4999999999999997e-172   NTclustered gi|2209095168|gb|OL472412.1| 2900382 g17322 i0 99.703 1 337 1 100 0 1 337 4425 4089 MAG: Brine shrimp arlivirus 7 isolate XZ/98-19 hypothetical protein, RNA-dependent RNA polymerase, and hypothetical protein genes, complete cds blastn 337 617 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 7
14344488 14344488 PRJNA1174207_P_NODE_21352_length_309_cov_1.580508_g20823_i0 PRJNA1174207 21352 309 1.580508 4.88376972 Dicistroviridae sp. 1955144 Viruses Viruses 316 9.269999999999999e-82   NTclustered gi|2756423860|gb|PP745721.1| 1955144 g20823 i0 85.342 1.98705501618123 307 43 99 2 3 308 700 1005 MAG: Dicistroviridae sp. isolate 017_5547 genomic sequence blastn 614 316 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
14344610 14344610 PRJNA1174207_P_NODE_27892_length_273_cov_2.035000_g27363_i0 PRJNA1174207 27892 273 2.035 5.55555 Tobamovirus capsici 3432865 Viruses Viruses 503 5.76e-138   NTclustered gi|2431684801|gb|ON557629.1| 12239 g27363 i0 100 99.5347985347985 272 0 99 0 1 272 4497 4768 Pepper mild mottle virus isolate G07, partial genome blastn 27173 503 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus capsici
14344934 14344934 PRJNA1174207_P_NODE_552_length_2568_cov_73.924248_g430_i0 PRJNA1174207 552 2568 73.924248 1898.37468864 Varroa picorna-like virus 2873563 Viruses Viruses 3504 0   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g430 i0 91.849 1.91471962616822 2515 199 98 6 1 2512 5421 7932 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 4917 3504 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus
15068297 15068297 PRJNA1174207_P_NODE_28172_length_272_cov_1.547739_g27643_i0 PRJNA1174207 28172 272 1.547739 4.20985008 Tobamovirus 12234 Viruses Viruses 501 2.06e-137   NTclustered gi|16580717|emb|AJ417701.1| 12253 g27643 i0 100 99.5073529411765 271 0 99 0 1 271 2142 2412 Tomato mosaic virus camellia strain, complete genome blastn 27066 501 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
15618740 15618740 PRJNA1174207_P_NODE_8393_length_543_cov_1.631915_g7869_i0 PRJNA1174207 8393 543 1.631915 8.86129845 Varroa picorna-like virus 2873563 Viruses Viruses 976 0   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g7869 i0 99.079 2 543 5 100 0 1 543 4690 4148 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 1086 976 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus
16342883 16342883 PRJNA1174207_P_NODE_12053_length_428_cov_1.636620_g11526_i0 PRJNA1174207 12053 428 1.63662 7.0047336 Viruses 10239 Viruses Viruses 425 2.11e-114   NTclustered gi|2756423860|gb|PP745721.1| 1955144 g11526 i0 84.941 1.98598130841122 425 58 99 5 5 426 1740 1319 MAG: Dicistroviridae sp. isolate 017_5547 genomic sequence blastn 850 425 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
16342922 16342922 PRJNA1174207_P_NODE_13793_length_393_cov_1.925000_g13264_i0 PRJNA1174207 13793 393 1.925 7.56525 Tobamovirus 12234 Viruses Viruses 721 0   NTclustered gi|2837380181|gb|PP099897.1| 1761477 g13264 i0 99.746 100 393 1 100 0 1 393 3833 3441 Tomato brown rugose fruit virus isolate NPPO-NL 36648757, complete genome blastn 39300 721 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
16343167 16343167 PRJNA1174207_P_NODE_3013_length_1056_cov_2.970498_g2607_i0 PRJNA1174207 3013 1056 2.970498 31.36845888 Alphavirus 11019 Viruses Viruses 1945 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g2607 i0 99.905 99.9943181818182 1056 1 100 0 1 1056 3920 4975 Getah virus strain M1, complete genome blastn 105594 1945 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
16892409 16892409 PRJNA1174207_P_NODE_11774_length_434_cov_3.277008_g11247_i0 PRJNA1174207 11774 434 3.277008 14.22221472 Varroa picorna-like virus 2873563 Viruses Viruses 725 0   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g11247 i0 96.984 1.98617511520737 431 13 99 0 4 434 5114 4684 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 862 725 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus
17618184 17618184 PRJNA1174207_P_NODE_1314_length_1675_cov_2.543071_g1070_i0 PRJNA1174207 1314 1675 2.543071 42.59643925 Alphavirus 11019 Viruses Viruses 3094 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g1070 i0 100 99.9982089552239 1675 0 100 0 1 1675 2264 3938 Getah virus strain M1, complete genome blastn 167497 3094 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
19441348 19441348 PRJNA1174207_P_NODE_14516_length_381_cov_1.250000_g13987_i0 PRJNA1174207 14516 381 1.25 4.7625 Varroa picorna-like virus 2873563 Viruses Viruses 442 1.8399999999999993e-119   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g13987 i0 87.632 0.99737532808399 380 47 99 0 2 381 3399 3020 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 380 442 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus
22717305 22717305 PRJNA1174207_P_NODE_12918_length_408_cov_2.743284_g12391_i0 PRJNA1174207 12918 408 2.743284 11.19259872 Alphavirus 11019 Viruses Viruses 749 0   NTclustered gi|52631669|gb|AY702913.1| 59300 g12391 i0 99.755 99.4656862745098 408 1 100 0 1 408 409 2 Getah virus from South Korea, complete genome blastn 40582 749 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
23992517 23992517 PRJNA1174207_P_NODE_10419_length_471_cov_1.467337_g9893_i0 PRJNA1174207 10419 471 1.467337 6.91115727 Alphavirus 11019 Viruses Viruses 870 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g9893 i0 100 100 471 0 100 0 1 471 1298 1768 Getah virus strain M1, complete genome blastn 47100 870 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah
25266707 25266707 PRJNA1174207_P_NODE_15220_length_370_cov_2.296296_g14691_i0 PRJNA1174207 15220 370 2.296296 8.4962952 Viruses 10239 Viruses Viruses 623 5.939999999999999e-174   NTclustered gi|2756423860|gb|PP745721.1| 1955144 g14691 i0 97.027 2 370 11 100 0 1 370 948 1317 MAG: Dicistroviridae sp. isolate 017_5547 genomic sequence blastn 740 623 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
25267160 25267160 PRJNA1174207_P_NODE_8560_length_536_cov_1.341253_g8036_i0 PRJNA1174207 8560 536 1.341253 7.18911608 Alphavirus 11019 Viruses Viruses 974 0   NTclustered gi|157734228|gb|EU015061.1| 59300 g8036 i0 99.44 99.9365671641791 536 3 100 0 1 536 8807 8272 Getah virus strain M1, complete genome blastn 53566 974 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae Alphavirus Alphavirus getah

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;