contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA1174207" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 315771 | 315771 | PRJNA1174207_P_NODE_32161_length_255_cov_3.472527_g31632_i0 | PRJNA1174207 | 32161 | 255 | 3.472527 | 8.85494385 | Candidatus Saccharibacteria bacterium oral taxon 955 | 2572087 | Bacteria | Bacteria | 455 | 1.51e-123 | NTclustered | gi|1663049602|gb|CP040008.1| | 2572087 | g31632 | i0 | 98.824 | 218.450980392157 | 255 | 3 | 100 | 0 | 1 | 255 | 138767 | 139021 | Candidatus Saccharibacteria bacterium oral taxon 955 strain PM004 chromosome, complete genome | blastn | 55705 | 455 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 955 | ||||||
| 3591189 | 3591189 | PRJNA1174207_P_NODE_38343_length_245_cov_0.895349_g37814_i0 | PRJNA1174207 | 38343 | 245 | 0.895349 | 2.19360505 | Bacteria | 2 | Bacteria | Bacteria | 182 | 2.7e-41 | NTclustered | gi|1958028780|gb|CP064973.1| | 2052152 | g37814 | i0 | 85.965 | 4.92244897959184 | 171 | 23 | 70 | 1 | 1 | 171 | 125886 | 126055 | MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome | blastn | 1206 | 183 | 0.994535519125683 | Bacteria | Bacteria candidate phyla | Candidatus Nomuraibacteriota | Candidatus Nomurabacteria bacterium | ||||||
| 4868650 | 4868650 | PRJNA1174207_P_NODE_26244_length_280_cov_2.019324_g25715_i0 | PRJNA1174207 | 26244 | 280 | 2.019324 | 5.6541072 | Candidatus Nanosynbacteraceae | 2093822 | Bacteria | Bacteria | 501 | 2.13e-137 | NTclustered | gi|1842055115|gb|CP040000.1| | 713059 | g25715 | i0 | 98.929 | 108.967857142857 | 280 | 3 | 100 | 0 | 1 | 280 | 146809 | 146530 | Candidatus Saccharibacteria bacterium oral taxon 488 strain FS03P chromosome, complete genome | blastn | 30511 | 501 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 488 | ||||||
| 5418901 | 5418901 | PRJNA1174207_P_NODE_37765_length_246_cov_0.890173_g37236_i0 | PRJNA1174207 | 37765 | 246 | 0.890173 | 2.18982558 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g37236 | i0 | 100 | 1 | 246 | 0 | 100 | 0 | 1 | 246 | 66746 | 66501 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 246 | 455 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 5418932 | 5418932 | PRJNA1174207_P_NODE_39545_length_243_cov_1.670588_g39016_i0 | PRJNA1174207 | 39545 | 243 | 1.670588 | 4.05952884 | Candidatus Peribacteria bacterium | 2053688 | Bacteria | Bacteria | 71.3 | 6.05e-8 | NTclustered | gi|2258832001|gb|CP060225.1| | 2053688 | g39016 | i0 | 82.558 | 1.90534979423868 | 86 | 10 | 35 | 5 | 158 | 241 | 628318 | 628400 | MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-9 chromosome, complete genome | blastn | 463 | 71.3 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peribacteria | Candidatus Peribacteria bacterium | |||||
| 9243360 | 9243360 | PRJNA1174207_P_NODE_19428_length_322_cov_1.116466_g18899_i0 | PRJNA1174207 | 19428 | 322 | 1.116466 | 3.59502052 | Candidatus Binatia bacterium | 2838779 | Bacteria | Bacteria | 420 | 7.19e-113 | NTclustered | gi|2814788338|emb|OY761159.2| | 2838779 | g18899 | i0 | 90.373 | 137.965838509317 | 322 | 27 | 99 | 4 | 1 | 320 | 3738050 | 3737731 | MAG: Candidatus Binatia bacterium isolate a3054953-5fa8-48fb-90a5-e173aac96f7a genome assembly, chromosome: 1 | blastn | 44425 | 420 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Binatota | Candidatus Binatia | Candidatus Binatia bacterium | |||||
| 11243908 | 11243908 | PRJNA1174207_P_NODE_28549_length_270_cov_2.766497_g28020_i0 | PRJNA1174207 | 28549 | 270 | 2.766497 | 7.4695419 | Candidatus Nanosynbacteraceae | 2093822 | Bacteria | Bacteria | 451 | 2.09e-122 | NTclustered | gi|1842055115|gb|CP040000.1| | 713059 | g28020 | i0 | 97.026 | 201.644444444444 | 269 | 6 | 99 | 2 | 1 | 268 | 146227 | 146494 | Candidatus Saccharibacteria bacterium oral taxon 488 strain FS03P chromosome, complete genome | blastn | 54444 | 451 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium oral taxon 488 | ||||||
| 14344419 | 14344419 | PRJNA1174207_P_NODE_17352_length_342_cov_3.055762_g16823_i0 | PRJNA1174207 | 17352 | 342 | 3.055762 | 10.45070604 | Candidatus Nanogingivalaceae bacterium | 2725942 | Bacteria | Bacteria | 532 | 9.47e-147 | NTclustered | gi|2070571752|gb|CP072208.2| | 2725942 | g16823 | i0 | 94.737 | 66.6169590643275 | 342 | 18 | 100 | 0 | 1 | 342 | 111393 | 111734 | MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome | blastn | 22783 | 532 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Nanosyncoccalia | Candidatus Nanogingivales | Candidatus Nanogingivalaceae | Candidatus Nanogingivalaceae bacterium | |||
| 14344680 | 14344680 | PRJNA1174207_P_NODE_31552_length_258_cov_1.664865_g31023_i0 | PRJNA1174207 | 31552 | 258 | 1.664865 | 4.2953517 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 477 | 3.2699999999999985e-130 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g31023 | i0 | 100 | 115.616279069767 | 258 | 0 | 100 | 0 | 1 | 258 | 138980 | 139237 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 29829 | 477 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 14344963 | 14344963 | PRJNA1174207_P_NODE_7412_length_593_cov_3.013462_g6891_i0 | PRJNA1174207 | 7412 | 593 | 3.013462 | 17.86982966 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 1046 | 0 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g6891 | i0 | 98.482 | 151.939291736931 | 593 | 9 | 100 | 0 | 1 | 593 | 138132 | 138724 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 90100 | 1046 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | ||
| 15618151 | 15618151 | PRJNA1174207_P_NODE_14173_length_386_cov_4.031949_g13644_i0 | PRJNA1174207 | 14173 | 386 | 4.031949 | 15.56332314 | Candidatus Gracilibacteria bacterium HOT-871 | 1540872 | Bacteria | Bacteria | 462 | 1.44e-125 | NTclustered | gi|1275383184|gb|CP017714.1| | 1540872 | g13644 | i0 | 88.342 | 82.8031088082902 | 386 | 44 | 100 | 1 | 1 | 386 | 891915 | 892299 | Candidatus Gracilibacteria bacterium HOT-871, complete genome | blastn | 31962 | 462 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Gracilibacteria bacterium HOT-871 | ||||||
| 15618562 | 15618562 | PRJNA1174207_P_NODE_36693_length_247_cov_0.885057_g36164_i0 | PRJNA1174207 | 36693 | 247 | 0.885057 | 2.18609079 | Candidatus Nanosynbacter lyticus | 2093824 | Bacteria | Bacteria | 418 | 1.9099999999999998e-112 | NTclustered | gi|2516688763|gb|CP124549.1| | 2093824 | g36164 | i0 | 97.166 | 9.97165991902834 | 247 | 7 | 100 | 0 | 1 | 247 | 802199 | 802445 | Candidatus Nanosynbacter lyticus strain ML1 chromosome, complete genome | blastn | 2463 | 418 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter lyticus | ||
| 15618593 | 15618593 | PRJNA1174207_P_NODE_38293_length_245_cov_0.895349_g37764_i0 | PRJNA1174207 | 38293 | 245 | 0.895349 | 2.19360505 | Candidatus Nanosynbacter sp. BB002 | 3393757 | Bacteria | Bacteria | 436 | 5.229999999999999e-118 | NTclustered | gi|2692798772|gb|CP146064.1| | 3393757 | g37764 | i0 | 98.776 | 2 | 245 | 3 | 100 | 0 | 1 | 245 | 170638 | 170882 | Candidatus Nanosynbacter sp. BB002 chromosome, complete genome | blastn | 490 | 436 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. BB002 | ||
| 18167634 | 18167634 | PRJNA1174207_P_NODE_9615_length_495_cov_2.661137_g9089_i0 | PRJNA1174207 | 9615 | 495 | 2.661137 | 13.17262815 | Candidatus Peribacteria bacterium | 2053688 | Bacteria | Bacteria | 387 | 1.17e-102 | NTclustered | gi|2258833497|gb|CP060226.1| | 2053688 | g9089 | i0 | 81.151 | 106.993939393939 | 504 | 75 | 100 | 18 | 1 | 495 | 814917 | 814425 | MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome | blastn | 52962 | 387 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peribacteria | Candidatus Peribacteria bacterium | |||||
| 20717287 | 20717287 | PRJNA1174207_P_NODE_42957_length_229_cov_2.397436_g42428_i0 | PRJNA1174207 | 42957 | 229 | 2.397436 | 5.49012844 | Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_9 | 1618663 | Bacteria | Bacteria | 307 | 3.95e-79 | NTclustered | gi|1118703468|gb|KX123381.1| | 1618663 | g42428 | i0 | 90.909 | 101.170305676856 | 231 | 18 | 100 | 2 | 1 | 229 | 2334 | 2105 | Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_9 16S ribosomal RNA gene, partial sequence | blastn | 23168 | 307 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Joergenseniibacteriota | Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_9 | ||||||
| 24541976 | 24541976 | PRJNA1174207_P_NODE_8080_length_558_cov_2.600000_g7556_i0 | PRJNA1174207 | 8080 | 558 | 2.6 | 14.508 | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB | 2933970 | Bacteria | Bacteria | 926 | 0 | NTclustered | gi|2179907571|gb|CP090820.1| | 2933970 | g7556 | i0 | 96.768 | 82.7544802867384 | 557 | 15 | 99 | 3 | 1 | 556 | 137407 | 137961 | MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome | blastn | 46177 | 926 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. HMT-348_TM7c-JB |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;