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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA1174207" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA1174207 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
315959 315959 PRJNA1174207_P_NODE_41021_length_241_cov_3.386905_g40492_i0 PRJNA1174207 41021 241 3.386905 8.16244105 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 412 8.64e-111   NTclustered gi|909719645|gb|KT185625.1| 5778 g40492 i0 97.51 1.94605809128631 241 6 100 0 1 241 6817 7057 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 469 412 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
315964 315964 PRJNA1174207_P_NODE_41321_length_241_cov_0.916667_g40792_i0 PRJNA1174207 41321 241 0.916667 2.20916747 Entamoeba gingivalis 38877 Evosea other_Eukaryota 438 1.4299999999999999e-118   NTclustered gi|2781670152|dbj|LC832224.1| 38877 g40792 i0 99.585 97.2946058091286 241 0 99 1 2 241 558 318 Entamoeba gingivalis ST1-1_human_Ishikawa_H118_2017 gene for 18S ribosomal RNA, partial sequence blastn 23448 438 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba gingivalis
2866304 2866304 PRJNA1174207_P_NODE_18943_length_326_cov_1.683794_g18414_i0 PRJNA1174207 18943 326 1.683794 5.48916844 Physarum cinereum 289951 Evosea other_Eukaryota 597 3.139999999999999e-166   NTclustered gi|224228205|dbj|AB435347.1| 289951 g18414 i0 99.693 100.328220858896 326 1 100 0 1 326 46 371 Physarum cinereum gene for small subunit ribosomal RNA, partial sequence, specimen_voucher: AK-06067 blastn 32707 597 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum cinereum
4142643 4142643 PRJNA1174207_P_NODE_33024_length_252_cov_1.290503_g32495_i0 PRJNA1174207 33024 252 1.290503 3.25206756 Acytostelium subglobosum 361139 Evosea other_Eukaryota 52.8 0.023   NTclustered gi|831754232|ref|XM_012892599.1| 1410327 g32495 i0 100 0.111111111111111 28 0 11 0 107 134 285 258 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
5418411 5418411 PRJNA1174207_P_NODE_12505_length_417_cov_2.825581_g11978_i0 PRJNA1174207 12505 417 2.825581 11.78267277 uncultured Vannellidae 544561 Discosea other_Eukaryota 246 1.71e-60   NTclustered gi|724028230|gb|KP099889.1| 544561 g11978 i0 88.67 40.3741007194245 203 21 49 1 166 368 929 729 Uncultured Vannellidae clone b18 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16836 246 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
5418873 5418873 PRJNA1174207_P_NODE_36285_length_247_cov_2.132184_g35756_i0 PRJNA1174207 36285 247 2.132184 5.26649448 Thecamoeba similis 242545 Discosea other_Eukaryota 193 1.26e-44   NTclustered gi|33946350|gb|AY294154.1| 242545 g35756 i0 88.608 26.4493927125506 158 18 64 0 90 247 1171 1014 Thecamoeba similis actin mRNA, complete cds blastn 6533 193 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
6693241 6693241 PRJNA1174207_P_NODE_13426_length_398_cov_3.664615_g12898_i0 PRJNA1174207 13426 398 3.664615 14.5851677 Lobosea sp. Borok 297386 Tubulinea other_Eukaryota 695 0   NTclustered gi|54306228|gb|AY626163.1| 297386 g12898 i0 98.241 76.3894472361809 398 6 100 1 1 398 594 990 Lobosea sp. Borok small subunit ribosomal RNA gene, partial sequence blastn 30403 695 1 Eukaryota Amoebozoa   Tubulinea         Lobosea sp. Borok
6693634 6693634 PRJNA1174207_P_NODE_33166_length_251_cov_1.865169_g32637_i0 PRJNA1174207 33166 251 1.865169 4.68157419 Ripella sp. 805 1217113 Discosea other_Eukaryota 394 3.28e-105   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g32637 i0 95.238 88.2589641434263 252 7 99 5 1 250 48 296 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 22153 394 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
8693316 8693316 PRJNA1174207_P_NODE_11927_length_431_cov_1.159218_g11400_i0 PRJNA1174207 11927 431 1.159218 4.99622958 Physarum 5790 Evosea other_Eukaryota 660 0   NTclustered gi|374255699|emb|HE614599.1| 289951 g11400 i0 94.432 59.5568445475638 431 20 100 3 1 431 655 1081 Physarum cinereum partial 18S rRNA gene, strain Idn-2 blastn 25669 660 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum cinereum
11794422 11794422 PRJNA1174207_P_NODE_37470_length_246_cov_0.890173_g36941_i0 PRJNA1174207 37470 246 0.890173 2.18982558 Entamoeba histolytica 5759 Evosea other_Eukaryota 156 1.65e-33   NTclustered gi|467633|emb|Z29969.1| 5759 g36941 i0 78.846 43.9268292682927 260 33 99 10 3 246 2274 2021 E.histolytica plasmid genes for ribosomal RNA and hemolysins HLY1, HLY5mc1 HLY5mc2 HLY4 blastn 10806 156 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
14344338 14344338 PRJNA1174207_P_NODE_13112_length_404_cov_3.178248_g12584_i0 PRJNA1174207 13112 404 3.178248 12.84012192 Protostelium mycophagum 472931 Evosea other_Eukaryota 741 0   NTclustered gi|262262921|gb|FJ766464.1| 472931 g12584 i0 99.752 48.990099009901 404 1 100 0 1 404 596 999 Protostelium mycophagum strain KA-T15-2 small subunit ribosomal RNA gene, partial sequence blastn 19792 741 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
15618687 15618687 PRJNA1174207_P_NODE_43673_length_206_cov_7.902256_g43144_i0 PRJNA1174207 43673 206 7.902256 16.27864736 Lobosea sp. Borok 297386 Tubulinea other_Eukaryota 374 3.3799999999999997e-99   NTclustered gi|54306228|gb|AY626163.1| 297386 g43144 i0 99.512 58.995145631068 205 1 99 0 1 205 1279 1483 Lobosea sp. Borok small subunit ribosomal RNA gene, partial sequence blastn 12153 374 1 Eukaryota Amoebozoa   Tubulinea         Lobosea sp. Borok
15618751 15618751 PRJNA1174207_P_NODE_9173_length_511_cov_1.305936_g8648_i0 PRJNA1174207 9173 511 1.305936 6.67333296 Vannella septentrionalis 197531 Discosea other_Eukaryota 167 1.7100000000000002e-36   NTclustered gi|300078499|gb|GU001161.1| 197531 g8648 i0 81.517 23.334637964775 211 32 41 5 156 363 2295 2089 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11924 167 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
16892722 16892722 PRJNA1174207_P_NODE_28574_length_270_cov_2.182741_g28045_i0 PRJNA1174207 28574 270 2.182741 5.8934007 Spumochlamys bryora 675832 Tubulinea other_Eukaryota 399 7.669999999999998e-107   NTclustered gi|259595677|gb|FJ705341.1| 675832 g28045 i0 93.358 44.9925925925926 271 17 100 1 1 270 1231 961 Spumochlamys bryora clone 1901 18S ribosomal RNA gene, partial sequence blastn 12148 399 1 Eukaryota Amoebozoa   Tubulinea Corycida   Microchlamyiidae Spumochlamys Spumochlamys bryora
16893015 16893015 PRJNA1174207_P_NODE_43434_length_219_cov_6.568493_g42905_i0 PRJNA1174207 43434 219 6.568493 14.38499967 Lobosea sp. Borok 297386 Tubulinea other_Eukaryota 383 6.05e-102   NTclustered gi|54306228|gb|AY626163.1| 297386 g42905 i0 98.165 50.662100456621 218 4 99 0 1 218 126 343 Lobosea sp. Borok small subunit ribosomal RNA gene, partial sequence blastn 11095 383 1 Eukaryota Amoebozoa   Tubulinea         Lobosea sp. Borok
16893041 16893041 PRJNA1174207_P_NODE_5494_length_721_cov_1.848765_g4990_i0 PRJNA1174207 5494 721 1.848765 13.32959565 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 907 0   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g4990 i0 89.365 35.8959778085992 724 74 100 1 1 721 2298 3021 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25881 907 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
18167213 18167213 PRJNA1174207_P_NODE_26255_length_280_cov_1.893720_g25726_i0 PRJNA1174207 26255 280 1.89372 5.302416 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 512 9.85e-141   NTclustered gi|330902861|gb|JF298256.1| 1017091 g25726 i0 99.643 70.8464285714286 280 1 100 0 1 280 312 591 Cochliopodium larifeili clone 907 18S ribosomal RNA gene, partial sequence blastn 19837 512 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
19441720 19441720 PRJNA1174207_P_NODE_32276_length_255_cov_1.681319_g31747_i0 PRJNA1174207 32276 255 1.681319 4.28736345 Stemonitopsis subcaespitosa 1048528 Evosea other_Eukaryota 326 1.2399999999999999e-84   NTclustered gi|426281760|gb|JX681133.1| 1048528 g31747 i0 90.04 82.2666666666667 251 25 98 0 1 251 244 494 Stemonitopsis subcaespitosa actin gene, partial cds blastn 20978 326 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitopsis Stemonitopsis subcaespitosa
20166828 20166828 PRJNA1174207_P_NODE_19796_length_318_cov_3.134694_g19267_i0 PRJNA1174207 19796 318 3.134694 9.96832692 Cryptodifflugia 1078833 Tubulinea other_Eukaryota 553 6.699999999999998e-153   NTclustered gi|345294024|gb|JF694280.1| 1078836 g19267 i0 98.107 85.6761006289308 317 6 99 0 2 318 1803 1487 Cryptodifflugia operculata small subunit ribosomal RNA gene, partial sequence blastn 27245 553 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
23992832 23992832 PRJNA1174207_P_NODE_29239_length_267_cov_5.896907_g28710_i0 PRJNA1174207 29239 267 5.896907 15.74474169 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 483 7.31e-132   NTclustered gi|909719645|gb|KT185625.1| 5778 g28710 i0 99.251 39.1198501872659 267 2 100 0 1 267 3608 3874 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 10445 483 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
24541663 24541663 PRJNA1174207_P_NODE_30920_length_261_cov_1.265957_g30391_i0 PRJNA1174207 30920 261 1.265957 3.30414777 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 350 7.539999999999999e-92   NTclustered gi|33946346|gb|AY294152.1| 242541 g30391 i0 90.805 92.7509578544061 261 24 100 0 1 261 919 659 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 24208 350 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;