RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1169999" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA1169999 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2866067 2866067 PRJNA1169999_P_NODE_3543_length_246_cov_0.890173_g3507_i0 PRJNA1169999 3543 246 0.890173 2.18982558 Serratia phage vB_SmaS-Smarc5 2777235 Viruses Viruses 394 3.2e-105   NTclustered gi|1930266092|gb|MT980834.1| 2777235 g3507 i0 95.528 1 246 11 100 0 1 246 55790 56035 Serratia phage vB_SmaS-Smarc5, complete genome blastn 246 394 1 Viruses               Serratia phage vB_SmaS-Smarc5
21991830 21991830 PRJNA1169999_P_NODE_1678_length_288_cov_1.116279_g1642_i0 PRJNA1169999 1678 288 1.116279 3.21488352 Rousettus bat papillomavirus 3141903 Viruses Viruses 52.8 0.027   NTclustered gi|2737909625|gb|PP711990.1| 3141903 g1642 i0 100 0.0972222222222222 28 0 10 0 148 175 3439 3466 MAG: Rousettus bat papillomavirus isolate 2A/Uganda/UGR52/2019 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Rousettus bat papillomavirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;