contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA1168532" and tax_kingdom = "Bacillati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1040232 | 1040232 | PRJNA1168532_S_NODE_226421_length_203_cov_1.762500_g223478_i0 | PRJNA1168532 | 226421 | 203 | 1.7625 | 3.577875 | root | 1 | Root_unresolved | Root_unresolved | 375 | 9.24e-100 | NTclustered | gi|2497259144|gb|OQ874907.1| | 1306 | g223478 | i0 | 100 | 100 | 203 | 0 | 100 | 0 | 1 | 203 | 498 | 296 | Streptococcus sp. strain QT-53 16S ribosomal RNA gene, partial sequence | blastn | 20300 | 375 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sp. | ||
| 1589845 | 1589845 | PRJNA1168532_S_NODE_219762_length_207_cov_1.310976_g216819_i0 | PRJNA1168532 | 219762 | 207 | 1.310976 | 2.71372032 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 355 | 1.23e-93 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g216819 | i0 | 97.585 | 325.729468599034 | 207 | 5 | 100 | 0 | 1 | 207 | 552129 | 551923 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 67426 | 355 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 5418256 | 5418256 | PRJNA1168532_S_NODE_256445_length_187_cov_1.437500_g253502_i0 | PRJNA1168532 | 256445 | 187 | 1.4375 | 2.688125 | uncultured Actinomycetes bacterium | 152507 | Bacteria | Bacteria | 62.1 | 2.66e-5 | NTclustered | gi|530190787|emb|HG379975.1| | 152507 | g253502 | i0 | 93.182 | 0.235294117647059 | 44 | 0 | 22 | 3 | 114 | 154 | 68 | 25 | Uncultured actinobacterium partial 16S rRNA gene, clone ET3Rk82 | blastn | 44 | 62.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | uncultured Actinomycetes bacterium | |||||
| 5418264 | 5418264 | PRJNA1168532_S_NODE_295985_length_170_cov_1.645669_g293042_i0 | PRJNA1168532 | 295985 | 170 | 1.645669 | 2.7976373 | Staphylococcus auricularis | 29379 | Bacteria | Bacteria | 315 | 1.64e-81 | NTclustered | gi|1403688813|emb|LS483491.1| | 29379 | g293042 | i0 | 100 | 495.6 | 170 | 0 | 100 | 0 | 1 | 170 | 1486561 | 1486730 | Staphylococcus auricularis strain NCTC12101 genome assembly, chromosome: 1 | blastn | 84252 | 315 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus auricularis | ||
| 6143095 | 6143095 | PRJNA1168532_S_NODE_221685_length_206_cov_1.159509_g218742_i0 | PRJNA1168532 | 221685 | 206 | 1.159509 | 2.38858854 | root | 1 | Root_unresolved | Root_unresolved | 241 | 3.5800000000000007e-59 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g218742 | i0 | 100 | 69.8155339805825 | 130 | 0 | 100 | 0 | 1 | 130 | 1185 | 1314 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 14382 | 241 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 7418092 | 7418092 | PRJNA1168532_S_NODE_242326_length_194_cov_2.337748_g239383_i0 | PRJNA1168532 | 242326 | 194 | 2.337748 | 4.53523112 | Streptococcus | 1301 | Bacteria | Bacteria | 353 | 4.1e-93 | NTclustered | gi|1943211519|gb|CP065707.1| | 1303 | g239383 | i0 | 99.485 | 428.329896907216 | 194 | 1 | 100 | 0 | 1 | 194 | 424105 | 424298 | Streptococcus oralis strain FDAARGOS_885 chromosome, complete genome | blastn | 83096 | 353 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 7968502 | 7968502 | PRJNA1168532_S_NODE_318607_length_162_cov_1.579832_g315664_i0 | PRJNA1168532 | 318607 | 162 | 1.579832 | 2.55932784 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 300 | 4.36e-77 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g315664 | i0 | 100 | 1 | 162 | 0 | 100 | 0 | 1 | 162 | 447386 | 447225 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 162 | 300 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 8693201 | 8693201 | PRJNA1168532_S_NODE_288207_length_173_cov_1.446154_g285264_i0 | PRJNA1168532 | 288207 | 173 | 1.446154 | 2.50184642 | root | 1 | Root_unresolved | Root_unresolved | 309 | 7.81e-80 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g285264 | i0 | 98.844 | 97.9479768786127 | 173 | 2 | 100 | 0 | 1 | 173 | 259 | 87 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 16945 | 309 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 8693203 | 8693203 | PRJNA1168532_S_NODE_5047_length_1001_cov_3.054280_g4069_i0 | PRJNA1168532 | 5047 | 1001 | 3.05428 | 30.5733428 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1844 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g4069 | i0 | 99.9 | 254.448551448551 | 1001 | 1 | 100 | 0 | 1 | 1001 | 55515 | 56515 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 254703 | 1844 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 9968382 | 9968382 | PRJNA1168532_S_NODE_347308_length_153_cov_1.572727_g344365_i0 | PRJNA1168532 | 347308 | 153 | 1.572727 | 2.40627231 | Corynebacterium | 1716 | Bacteria | Bacteria | 283 | 4.0799999999999995e-72 | NTclustered | gi|2550484788|gb|CP100380.1| | 38284 | g344365 | i0 | 100 | 368 | 153 | 0 | 100 | 0 | 1 | 153 | 2492766 | 2492918 | Corynebacterium accolens strain CA3 chromosome | blastn | 56304 | 283 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 11243535 | 11243535 | PRJNA1168532_S_NODE_250889_length_190_cov_1.102041_g247946_i0 | PRJNA1168532 | 250889 | 190 | 1.102041 | 2.0938779 | Staphylococcus | 1279 | Bacteria | Bacteria | 351 | 1.4399999999999997e-92 | NTclustered | gi|1848617844|gb|CP053957.1| | 29388 | g247946 | i0 | 100 | 84.2473684210526 | 190 | 0 | 100 | 0 | 1 | 190 | 2002019 | 2001830 | Staphylococcus capitis strain FDAARGOS_753 chromosome, complete genome | blastn | 16007 | 351 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus capitis | ||
| 11793795 | 11793795 | PRJNA1168532_S_NODE_288550_length_173_cov_1.261538_g285607_i0 | PRJNA1168532 | 288550 | 173 | 1.261538 | 2.18246074 | Corynebacterium kefirresidentii | 1979527 | Bacteria | Bacteria | 320 | 3.61e-83 | NTclustered | gi|2869817591|gb|CP175775.1| | 1979527 | g285607 | i0 | 100 | 355.71676300578 | 173 | 0 | 100 | 0 | 1 | 173 | 1846 | 1674 | Corynebacterium kefirresidentii strain YSMAA3_1_H1 chromosome, complete genome | blastn | 61539 | 320 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kefirresidentii | ||
| 12518935 | 12518935 | PRJNA1168532_S_NODE_206770_length_215_cov_1.308140_g203827_i0 | PRJNA1168532 | 206770 | 215 | 1.30814 | 2.812501 | Micrococcus | 1269 | Bacteria | Bacteria | 350 | 5.999999999999999e-92 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g203827 | i0 | 96.244 | 312.158139534884 | 213 | 8 | 99 | 0 | 1 | 213 | 347478 | 347266 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 67114 | 350 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 16342763 | 16342763 | PRJNA1168532_S_NODE_55373_length_409_cov_1.568306_g52501_i0 | PRJNA1168532 | 55373 | 409 | 1.568306 | 6.41437154 | Bacillati | 1783272 | Bacteria | Bacteria | 715 | 0 | NTclustered | gi|9623518|gb|AF269622.1|AF269622 | 1282 | g52501 | i0 | 98.997 | 505.672371638142 | 399 | 4 | 98 | 0 | 11 | 409 | 3766 | 3368 | Staphylococcus epidermidis strain SR1 clone step.1014c03 genomic sequence | blastn | 206820 | 715 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 20166586 | 20166586 | PRJNA1168532_S_NODE_110356_length_306_cov_1.844106_g107413_i0 | PRJNA1168532 | 110356 | 306 | 1.844106 | 5.64296436 | Corynebacterium | 1716 | Bacteria | Bacteria | 555 | 1.7799999999999996e-153 | NTclustered | gi|2869817591|gb|CP175775.1| | 1979527 | g107413 | i0 | 99.346 | 339.052287581699 | 306 | 2 | 100 | 0 | 1 | 306 | 2773 | 3078 | Corynebacterium kefirresidentii strain YSMAA3_1_H1 chromosome, complete genome | blastn | 103750 | 555 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kefirresidentii | ||
| 20166591 | 20166591 | PRJNA1168532_S_NODE_226536_length_203_cov_1.625000_g223593_i0 | PRJNA1168532 | 226536 | 203 | 1.625 | 3.29875 | Staphylococcus | 1279 | Bacteria | Bacteria | 375 | 9.24e-100 | NTclustered | gi|2071692135|gb|CP073824.1| | 1282 | g223593 | i0 | 100 | 545.768472906404 | 203 | 0 | 100 | 0 | 1 | 203 | 699770 | 699972 | Staphylococcus epidermidis strain B1200599 chromosome, complete genome | blastn | 110791 | 375 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 20716532 | 20716532 | PRJNA1168532_S_NODE_254117_length_188_cov_1.620690_g251174_i0 | PRJNA1168532 | 254117 | 188 | 1.62069 | 3.0468972 | Mycoplasma ovis | 171632 | Bacteria | Bacteria | 187 | 4.2299999999999985e-43 | NTclustered | gi|566058721|gb|CP006935.1| | 1415773 | g251174 | i0 | 84.574 | 1 | 188 | 29 | 100 | 0 | 1 | 188 | 59113 | 59300 | Mycoplasma ovis str. Michigan, complete genome | blastn | 188 | 187 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma ovis | ||
| 22717158 | 22717158 | PRJNA1168532_S_NODE_210058_length_213_cov_1.176471_g207115_i0 | PRJNA1168532 | 210058 | 213 | 1.176471 | 2.50588323 | Corynebacterium | 1716 | Bacteria | Bacteria | 344 | 2.76e-90 | NTclustered | gi|2869858840|gb|CP175793.1| | 3383589 | g207115 | i0 | 100 | 319.201877934272 | 186 | 0 | 87 | 0 | 1 | 186 | 723712 | 723527 | Corynebacterium sp. YSMAA1_1_D6 chromosome, complete genome | blastn | 67990 | 344 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. YSMAA1_1_D6 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;