RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1167252" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 11 ✖

bioproject 1

  • PRJNA1167252 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1588906 1588906 PRJNA1167252_P_NODE_13202_length_339_cov_2.323308_g12929_i0 PRJNA1167252 13202 339 2.323308 7.87601412 Potexvirus marmorplantagonis 3433852 Viruses Viruses 627 4.1799999999999996e-175   NTclustered gi|927440244|emb|LN651193.1| 28354 g12929 i0 100 50.6253687315634 339 0 100 0 1 339 597 935 Plantago asiatica mosaic virus CP gene for coat protein, isolate LIL1.2 blastn 17162 627 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis
1589433 1589433 PRJNA1167252_P_NODE_4842_length_612_cov_1.445269_g4572_i0 PRJNA1167252 4842 612 1.445269 8.84504628 Potexvirus marmorplantagonis 3433852 Viruses Viruses 1109 0   NTclustered gi|1049927946|gb|KX245539.1| 28354 g4572 i0 99.346 49.6078431372549 612 4 100 0 1 612 5469 4858 Plantago asiatica mosaic virus strain CAAS01, complete genome blastn 30360 1109 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis
1589515 1589515 PRJNA1167252_P_NODE_7802_length_459_cov_1.515544_g7529_i0 PRJNA1167252 7802 459 1.515544 6.95634696 Potexvirus marmorplantagonis 3433852 Viruses Viruses 848 0   NTclustered gi|1049927946|gb|KX245539.1| 28354 g7529 i0 100 26.880174291939 459 0 100 0 1 459 1081 623 Plantago asiatica mosaic virus strain CAAS01, complete genome blastn 12338 848 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis
6692281 6692281 PRJNA1167252_P_NODE_18106_length_287_cov_1.093458_g17833_i0 PRJNA1167252 18106 287 1.093458 3.13822446 Potexvirus marmorplantagonis 3433852 Viruses Viruses 520 6.049999999999999e-143   NTclustered gi|1018644214|gb|KU159092.1| 28354 g17833 i0 99.303 15 287 2 100 0 1 287 1448 1162 Plantago asiatica mosaic virus isolate Ko-JJ_3-1, complete genome blastn 4305 520 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis
10518570 10518570 PRJNA1167252_P_NODE_9709_length_404_cov_1.413897_g9436_i0 PRJNA1167252 9709 404 1.413897 5.71214388 Potexvirus marmorplantagonis 3433852 Viruses Viruses 741 0   NTclustered gi|1018644205|gb|KU159091.1| 28354 g9436 i0 99.752 15.8514851485149 404 1 100 0 1 404 2190 1787 Plantago asiatica mosaic virus isolate Ko-JJ_2-2, complete genome blastn 6404 741 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis
13067913 13067913 PRJNA1167252_P_NODE_15111_length_316_cov_1.279835_g14838_i0 PRJNA1167252 15111 316 1.279835 4.0442786 Potexvirus marmorplantagonis 3433852 Viruses Viruses 584 2.359999999999999e-162   NTclustered gi|1049927946|gb|KX245539.1| 28354 g14838 i0 100 24.5189873417722 316 0 100 0 1 316 3610 3925 Plantago asiatica mosaic virus strain CAAS01, complete genome blastn 7748 584 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis
14343129 14343129 PRJNA1167252_P_NODE_10792_length_380_cov_1.462541_g10519_i0 PRJNA1167252 10792 380 1.462541 5.5576558 Potexvirus marmorplantagonis 3433852 Viruses Viruses 675 0   NTclustered gi|1049927946|gb|KX245539.1| 28354 g10519 i0 98.684 16.8289473684211 380 5 100 0 1 380 1820 1441 Plantago asiatica mosaic virus strain CAAS01, complete genome blastn 6395 675 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis
16891342 16891342 PRJNA1167252_P_NODE_13574_length_334_cov_1.712644_g13301_i0 PRJNA1167252 13574 334 1.712644 5.72023096 Potexvirus marmorplantagonis 3433852 Viruses Viruses 612 1.15e-170   NTclustered gi|1018644214|gb|KU159092.1| 28354 g13301 i0 99.701 34.3622754491018 334 1 100 0 1 334 3320 3653 Plantago asiatica mosaic virus isolate Ko-JJ_3-1, complete genome blastn 11477 612 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis
18166022 18166022 PRJNA1167252_P_NODE_18615_length_283_cov_1.057143_g18342_i0 PRJNA1167252 18615 283 1.057143 2.99171469 Ripagrog virus 3130723 Viruses Viruses 281 3.06e-71   NTclustered gi|2717320584|gb|PP173025.1| 3130723 g18342 i0 89.286 184.017667844523 224 24 79 0 4 227 1939 1716 MAG: Ripagrog virus isolate KCAP2_k141_407948 genomic sequence blastn 52077 281 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripagrog virus
21991292 21991292 PRJNA1167252_P_NODE_27238_length_245_cov_1.936047_g26965_i0 PRJNA1167252 27238 245 1.936047 4.74331515 Potexvirus marmorplantagonis 3433852 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|927440246|emb|LN651194.1| 28354 g26965 i0 100 41.6571428571429 245 0 100 0 1 245 625 381 Plantago asiatica mosaic virus CP gene for coat protein, isolate LIL6 blastn 10206 453 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis
24540392 24540392 PRJNA1167252_P_NODE_21300_length_262_cov_1.650794_g21027_i0 PRJNA1167252 21300 262 1.650794 4.32508028 Potexvirus marmorplantagonis 3433852 Viruses Viruses 468 1.9999999999999996e-127   NTclustered gi|545669889|gb|KF471012.1| 28354 g21027 i0 98.855 15 262 3 100 0 1 262 761 500 Plantago asiatica mosaic virus RNA-dependent RNA polymerase gene, partial cds; and triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds blastn 3930 468 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmorplantagonis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;