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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1166865" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 11 ✖

bioproject 1

  • PRJNA1166865 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3590023 3590023 PRJNA1166865_P_NODE_12643_length_600_cov_37.620493_g12409_i0 PRJNA1166865 12643 600 37.620493 225.722958 root 1 Root_unresolved Root_unresolved 1090 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g12409 i0 100 98.8483333333333 590 0 98 0 1 590 2311 1722 Unidentified adenovirus strain CHOP Ad5 blastn 59309 1090 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
3590109 3590109 PRJNA1166865_P_NODE_663_length_1761_cov_47.666469_g622_i0 PRJNA1166865 663 1761 47.666469 839.40651909 root 1 Root_unresolved Root_unresolved 3234 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g622 i0 99.83 99.9789892106757 1761 2 100 1 1 1761 4065 2306 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 176063 3253 0.994159237626806 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
5416656 5416656 PRJNA1166865_P_NODE_70565_length_261_cov_1.601064_g70324_i0 PRJNA1166865 70565 261 1.601064 4.17877704 Potyvirus sacchari 3240610 Viruses Viruses 52.8 0.024   NTclustered gi|1766756986|gb|MK684196.1| 12224 g70324 i0 100 0.10727969348659 28 0 11 0 209 236 622 595 Sugarcane mosaic virus isolate RwS17_002 polyprotein gene, partial cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sacchari
6142406 6142406 PRJNA1166865_P_NODE_2085_length_1263_cov_6.807563_g1991_i0 PRJNA1166865 2085 1263 6.807563 85.97952069 Orthorubulavirus 2560195 Viruses Viruses 2314 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1991 i0 99.762 84.507521773555 1263 1 100 1 1 1263 1776 3036 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 106733 2327 0.994413407821229 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
6142515 6142515 PRJNA1166865_P_NODE_805_length_1677_cov_51.791147_g622_i1 PRJNA1166865 805 1677 51.791147 868.53753519 root 1 Root_unresolved Root_unresolved 2217 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g622 i1 99.917 99.933214072749 1203 1 100 0 475 1677 3508 2306 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 167588 2222 0.997749774977498 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
7417542 7417542 PRJNA1166865_P_NODE_886_length_1631_cov_6.725289_g829_i0 PRJNA1166865 886 1631 6.725289 109.68946359 Orthorubulavirus 2560195 Viruses Viruses 2979 0   NTclustered gi|146351838|gb|EF543648.1| 149595 g829 i0 99.632 76.4794604537094 1631 6 100 0 1 1631 2 1632 Canine parainfluenza virus strain FA nucleocapsid (N) gene, complete cds blastn 124738 2985 0.997989949748744 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
9241527 9241527 PRJNA1166865_P_NODE_70808_length_260_cov_2.379679_g70567_i0 PRJNA1166865 70808 260 2.379679 6.1871654 Simplexvirus humanalpha1 3050292 Viruses Viruses 54.7 0.007   NTclustered gi|1407524148|gb|MG999872.1| 10298 g70567 i0 100 0.111538461538462 29 0 11 0 93 121 130495 130523 Human alphaherpesvirus 1 strain 2003-15756, partial genome blastn 29 54.7 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
11242846 11242846 PRJNA1166865_P_NODE_2729_length_1148_cov_5.747907_g2618_i0 PRJNA1166865 2729 1148 5.747907 65.98597236 Paramyxoviridae 11158 Viruses Viruses 2104 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g2618 i0 99.739 68.9477351916376 1148 3 100 0 1 1148 2057 3204 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 79152 2115 0.994799054373522 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
18165039 18165039 PRJNA1166865_P_NODE_63595_length_277_cov_2.142157_g63354_i0 PRJNA1166865 63595 277 2.142157 5.93377489 Burkholderia phage BCSR5 2805747 Viruses Viruses 67.6 9.1e-7   NTclustered gi|1971775256|gb|MW460245.1| 2805747 g63354 i0 100 0.545126353790614 36 0 13 0 103 138 619 654 Burkholderia phage BCSR5, complete genome blastn 151 67.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Burkholderia phage BCSR5
21441593 21441593 PRJNA1166865_P_NODE_737_length_1714_cov_4.862279_g690_i0 PRJNA1166865 737 1714 4.862279 83.33946206 Orthorubulavirus 2560195 Viruses Viruses 3155 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g690 i0 99.883 97.0933488914819 1714 2 100 0 1 1714 6203 4490 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 166418 3155 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
24539282 24539282 PRJNA1166865_P_NODE_60520_length_284_cov_1.924171_g60279_i0 PRJNA1166865 60520 284 1.924171 5.46464564 Sinorhizobium phage StopSmel 2981545 Viruses Viruses 54.7 0.007   NTclustered gi|2622989299|gb|OR786374.1| 2981545 g60279 i0 96.875 0.112676056338028 32 1 11 0 201 232 26669 26700 Sinorhizobium phage StopSmel, complete genome blastn 32 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Sinorhizobium phage StopSmel

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;