RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1166865" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1166865 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2863396 2863396 PRJNA1166865_P_NODE_28863_length_400_cov_7.284404_g28622_i0 PRJNA1166865 28863 400 7.284404 29.137616 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 682 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g28622 i0 97.727 0.99 396 9 99 0 5 400 407 12 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 396 682 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
5416503 5416503 PRJNA1166865_P_NODE_64225_length_276_cov_1.492611_g63984_i0 PRJNA1166865 64225 276 1.492611 4.11960636 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.025   NTclustered gi|690462778|emb|LN003060.1| 99802 g63984 i0 100 0.101449275362319 28 0 10 0 82 109 12345 12318 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0003035 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
8692632 8692632 PRJNA1166865_P_NODE_93767_length_241_cov_1.375000_g93526_i0 PRJNA1166865 93767 241 1.375 3.31375 Metazoa 33208 Platyhelminthes Platyhelminthes 446 8.519999999999999e-121   NTclustered gi|1126394097|gb|AY813297.2| 6182 g93526 i0 100 38.7842323651452 241 0 100 0 1 241 335 95 Schistosoma japonicum clone SJCHGC01483 unknown mRNA, partial cds blastn 9347 446 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
15067331 15067331 PRJNA1166865_P_NODE_79092_length_249_cov_0.875000_g78851_i0 PRJNA1166865 79092 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 52.8 0.023   NTclustered gi|687592779|emb|LK542101.1| 57078 g78851 i0 100 0.337349397590361 28 0 11 0 15 42 226 199 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0139934 blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
16890820 16890820 PRJNA1166865_P_NODE_77734_length_250_cov_0.870056_g77493_i0 PRJNA1166865 77734 250 0.870056 2.17514 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 69.4 2.25e-7   NTclustered gi|690550114|emb|LN103918.1| 99802 g77493 i0 97.5 3.12 40 1 16 0 167 206 2953 2992 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0098179 blastn 780 69.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
19439497 19439497 PRJNA1166865_P_NODE_69776_length_263_cov_1.268421_g69535_i0 PRJNA1166865 69776 263 1.268421 3.33594723 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.024   NTclustered gi|687592672|emb|LK540404.1| 57078 g69535 i0 100 0.106463878326996 28 0 11 0 137 164 1001 1028 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0008917 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
23991781 23991781 PRJNA1166865_P_NODE_45879_length_324_cov_1.561753_g45638_i0 PRJNA1166865 45879 324 1.561753 5.06007972 Metazoa 33208 Platyhelminthes Platyhelminthes 52.8 0.03   NTclustered gi|687582860|emb|LK586893.1| 57078 g45638 i0 100 0.691358024691358 28 0 9 0 87 114 878 905 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0179033 blastn 224 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;