contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA1166865" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 312901 | 312901 | PRJNA1166865_P_NODE_42181_length_336_cov_2.923954_g41940_i0 | PRJNA1166865 | 42181 | 336 | 2.923954 | 9.82448544 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 621 | 1.9299999999999997e-173 | NTclustered | gi|413006566|emb|Z92784.2| | 6239 | g41940 | i0 | 100 | 99.6398809523809 | 336 | 0 | 100 | 0 | 1 | 336 | 28543 | 28878 | Caenorhabditis elegans Cosmid F31C3, complete sequence | blastn | 33479 | 621 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 4139111 | 4139111 | PRJNA1166865_P_NODE_18504_length_499_cov_1.626761_g18263_i0 | PRJNA1166865 | 18504 | 499 | 1.626761 | 8.11753739 | Caenorhabditis briggsae | 6238 | Nematoda | Nematoda | 152 | 4.6699999999999996e-32 | NTclustered | gi|11094977|gb|AC084527.1|CBRG21F09 | 6238 | g18263 | i0 | 80.808 | 0.793587174348697 | 198 | 34 | 39 | 4 | 285 | 480 | 22407 | 22212 | Caenorhabditis briggsae cosmid G21F09, complete sequence | blastn | 396 | 152 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 4140759 | 4140759 | PRJNA1166865_P_NODE_85724_length_246_cov_0.890173_g85483_i0 | PRJNA1166865 | 85724 | 246 | 0.890173 | 2.18982558 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 455 | 1.4500000000000002e-123 | NTclustered | gi|1972266898|ref|NM_001028105.7| | 6239 | g85483 | i0 | 100 | 7.98780487804878 | 246 | 0 | 100 | 0 | 1 | 246 | 2492 | 2737 | Caenorhabditis elegans Vitellogenin-6 (vit-6), partial mRNA | blastn | 1965 | 455 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 6690504 | 6690504 | PRJNA1166865_P_NODE_31106_length_386_cov_2.440895_g30865_i0 | PRJNA1166865 | 31106 | 386 | 2.440895 | 9.4218547 | Caenorhabditis elegans | 6239 | Nematoda | Nematoda | 708 | 0 | NTclustered | gi|413006566|emb|Z92784.2| | 6239 | g30865 | i0 | 99.741 | 84.3834196891192 | 386 | 1 | 100 | 0 | 1 | 386 | 26592 | 26977 | Caenorhabditis elegans Cosmid F31C3, complete sequence | blastn | 32572 | 708 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 6690598 | 6690598 | PRJNA1166865_P_NODE_34926_length_366_cov_2.040956_g34685_i0 | PRJNA1166865 | 34926 | 366 | 2.040956 | 7.46989896 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 161 | 5.529999999999998e-35 | NTclustered | gi|1376135061|ref|XM_024647529.1| | 34506 | g34685 | i0 | 76.568 | 1.8879781420765 | 303 | 65 | 82 | 6 | 7 | 306 | 535 | 834 | Strongyloides ratti BcDNA.GM09489 (SRAE_1000066900), partial mRNA | blastn | 691 | 161 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 7417478 | 7417478 | PRJNA1166865_P_NODE_48446_length_316_cov_16.510288_g48205_i0 | PRJNA1166865 | 48446 | 316 | 16.510288 | 52.17251008 | Caenorhabditis | 6237 | Nematoda | Nematoda | 63.9 | 1.37e-5 | NTclustered | gi|1972228534|ref|NM_001316854.4| | 6239 | g48205 | i0 | 95 | 0.493670886075949 | 40 | 2 | 13 | 0 | 31 | 70 | 47 | 86 | Caenorhabditis elegans 60S ribosomal protein L41 (rpl-41.2), mRNA | blastn | 156 | 63.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 11790917 | 11790917 | PRJNA1166865_P_NODE_20830_length_470_cov_2.806045_g20589_i0 | PRJNA1166865 | 20830 | 470 | 2.806045 | 13.1884115 | Pristionchus sp. 15 RS5229 | 452809 | Nematoda | Nematoda | 193 | 2.58e-44 | NTclustered | gi|150984457|gb|EF634871.1| | 452809 | g20589 | i0 | 77.848 | 19.7404255319149 | 316 | 66 | 67 | 3 | 41 | 354 | 16 | 329 | Pristionchus sp. 15 RS5229 small subunit ribosomal protein 8 (rps-8) mRNA, partial cds | blastn | 9278 | 193 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus sp. 15 RS5229 | |
| 13792996 | 13792996 | PRJNA1166865_P_NODE_89411_length_244_cov_0.900585_g89170_i0 | PRJNA1166865 | 89411 | 244 | 0.900585 | 2.1974274 | Caenorhabditis | 6237 | Nematoda | Nematoda | 451 | 1.86e-122 | NTclustered | gi|2460759835|gb|OQ645709.1| | 6239 | g89170 | i0 | 100 | 101 | 244 | 0 | 100 | 0 | 1 | 244 | 343 | 100 | Caenorhabditis elegans strain H60A small subunit ribosomal RNA gene, partial sequence | blastn | 24644 | 451 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis elegans | |
| 17617333 | 17617333 | PRJNA1166865_P_NODE_46814_length_321_cov_1.907258_g46573_i0 | PRJNA1166865 | 46814 | 321 | 1.907258 | 6.12229818 | Caenorhabditis | 6237 | Nematoda | Nematoda | 593 | 3.9899999999999986e-165 | NTclustered | gi|356605872|gb|JN636061.1| | 6238 | g46573 | i0 | 100 | 98.8629283489097 | 321 | 0 | 100 | 0 | 1 | 321 | 4935 | 4615 | Caenorhabditis briggsae 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 31735 | 593 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis briggsae | |
| 19439766 | 19439766 | PRJNA1166865_P_NODE_80556_length_248_cov_1.680000_g80315_i0 | PRJNA1166865 | 80556 | 248 | 1.68 | 4.1664 | Caenorhabditis remanei | 31234 | Nematoda | Nematoda | 60.2 | 1.34e-4 | NTclustered | gi|2445352199|ref|XM_003095007.2| | 31234 | g80315 | i0 | 81.579 | 0.419354838709677 | 76 | 10 | 30 | 4 | 175 | 248 | 205 | 278 | Caenorhabditis remanei uncharacterized protein (GCK72_002938), partial mRNA | blastn | 104 | 60.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Rhabditidae | Caenorhabditis | Caenorhabditis remanei | |
| 24538878 | 24538878 | PRJNA1166865_P_NODE_4540_length_951_cov_11.276765_g4378_i0 | PRJNA1166865 | 4540 | 951 | 11.276765 | 107.24203515 | Diplogastrellus sp. VS-2014 | 1538693 | Nematoda | Nematoda | 401 | 8.289999999999999e-107 | NTclustered | gi|675118831|gb|KJ877295.1| | 1538693 | g4378 | i0 | 77.171 | 56.7644584647739 | 714 | 147 | 74 | 16 | 78 | 783 | 43 | 748 | Diplogastrellus sp. VS-2014 strain RS5608 large subunit ribosomal protein 2 (rpl-2) mRNA, partial cds | blastn | 53983 | 401 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Diplogasteridae | Diplogastrellus | Diplogastrellus sp. VS-2014 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;