RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1166865" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1166865 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7966881 7966881 PRJNA1166865_P_NODE_71307_length_259_cov_1.752688_g71066_i0 PRJNA1166865 71307 259 1.752688 4.53946192 Diadema antillarum 105358 Echinodermata other_Eukaryota 228 3.649999999999999e-55   NTclustered gi|2919532506|ref|XM_071655450.1| 105358 g71066 i0 83.267 21.2741312741313 251 39 96 3 10 258 1423 1174 PREDICTED: Diadema antillarum V-type proton ATPase subunit B (LOC139745038), mRNA blastn 5510 228 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
11791056 11791056 PRJNA1166865_P_NODE_25870_length_423_cov_0.822857_g25629_i0 PRJNA1166865 25870 423 0.822857 3.48068511 Patiria miniata 46514 Echinodermata other_Eukaryota 54.7 0.011   NTclustered gi|1944858367|ref|XM_038195497.1| 46514 g25629 i0 96.875 0.0756501182033097 32 1 8 0 95 126 1110 1141 PREDICTED: Patiria miniata lysophospholipid acyltransferase 2-like (LOC119724436), mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;