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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1166865" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1166865 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6691669 6691669 PRJNA1166865_P_NODE_7866_length_751_cov_1.330383_g7657_i0 PRJNA1166865 7866 751 1.330383 9.99117633 Synchytrium microbalum 1806994 Fungi Fungi 562 2.81e-155   NTclustered gi|1759161090|ref|XM_031170872.1| 1806994 g7657 i0 80.926 86.4314247669774 734 121 97 16 4 729 1343 621 Synchytrium microbalum succinate dehydrogenase (SmJEL517_g04944), partial mRNA blastn 64910 562 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
14341273 14341273 PRJNA1166865_P_NODE_2052_length_1270_cov_1.801170_g1958_i0 PRJNA1166865 2052 1270 1.80117 22.874859 Polychytrium aggregatum 110093 Fungi Fungi 857 0   NTclustered gi|2432145256|ref|XM_053110808.1| 110093 g1958 i0 82.104 83.1976377952756 1017 168 80 13 6 1015 709 1718 Polychytrium aggregatum hsp71-like protein (BJ171DRAFT_502900), mRNA blastn 105661 857 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
16890756 16890756 PRJNA1166865_P_NODE_74894_length_251_cov_1.297753_g74653_i0 PRJNA1166865 74894 251 1.297753 3.25736003 Polychytrium aggregatum 110093 Fungi Fungi 121 6.149999999999999e-23   NTclustered gi|2432140698|ref|XM_053110328.1| 110093 g74653 i0 82.143 5.26693227091633 140 25 56 0 106 245 65 204 Polychytrium aggregatum 60S ribosomal protein L11 (BJ171DRAFT_498001), mRNA blastn 1322 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18164904 18164904 PRJNA1166865_P_NODE_57815_length_291_cov_0.917431_g57574_i0 PRJNA1166865 57815 291 0.917431 2.66972421 Polychytrium aggregatum 110093 Fungi Fungi 235 2.4899999999999997e-57   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g57574 i0 83.806 56.0137457044674 247 40 85 0 30 276 904 658 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 16300 235 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19438025 19438025 PRJNA1166865_P_NODE_10756_length_648_cov_1.608696_g10525_i0 PRJNA1166865 10756 648 1.608696 10.42435008 Fimicolochytrium jonesii 1396493 Fungi Fungi 403 1.5399999999999993e-107   NTclustered gi|2432080769|ref|XM_053070516.1| 1396493 g10525 i0 82.505 72.6358024691358 463 77 71 4 126 586 1106 646 Fimicolochytrium jonesii mitochondrial carrier domain-containing protein (EV422DRAFT_532223), mRNA blastn 47068 403 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
21441575 21441575 PRJNA1166865_P_NODE_6437_length_824_cov_2.585885_g6242_i0 PRJNA1166865 6437 824 2.585885 21.3076924 Eukaryota 2759 Fungi Fungi 424 1.52e-113   NTclustered gi|30088684|gb|AY238445.1| 4757 g6242 i0 78.891 65.2657766990291 649 120 78 15 110 751 126 764 Neocallimastix frontalis succinyl-CoA synthetase alpha subunit mRNA, complete cds blastn 53779 424 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix frontalis
23264948 23264948 PRJNA1166865_P_NODE_37739_length_353_cov_3.696429_g37498_i0 PRJNA1166865 37739 353 3.696429 13.04839437 Polychytrium aggregatum 110093 Fungi Fungi 202 3.129999999999999e-47   NTclustered gi|2432129762|ref|XM_053108984.1| 110093 g37498 i0 80.741 2.26628895184136 270 42 75 9 9 273 70 334 Polychytrium aggregatum 60S ribosomal protein L37 (BJ171DRAFT_484391), mRNA blastn 800 202 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
24538636 24538636 PRJNA1166865_P_NODE_36240_length_360_cov_1.940767_g35999_i0 PRJNA1166865 36240 360 1.940767 6.9867612 Spizellomyces punctatus 109760 Fungi Fungi 174 6.98e-39   NTclustered gi|1026980085|ref|XM_016752373.1| 645134 g35999 i0 82.5 2.98611111111111 200 34 56 1 160 359 181 379 Spizellomyces punctatus DAOM BR117 40S ribosomal protein S15 (SPPG_04127), mRNA blastn 1075 174 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;