RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1166865" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 4 ✖

bioproject 1

  • PRJNA1166865 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2864575 2864575 PRJNA1166865_P_NODE_78903_length_249_cov_1.153409_g78662_i0 PRJNA1166865 78903 249 1.153409 2.87198841 Deinococcus sp. NW-56 2080419 Bacteria Bacteria 401 1.9399999999999993e-107   NTclustered gi|1339790003|gb|CP026516.1| 2080419 g78662 i0 99.103 440.204819277108 223 2 90 0 1 223 544062 544284 Deinococcus sp. NW-56 chromosome, complete genome blastn 109611 401 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. NW-56
4140873 4140873 PRJNA1166865_P_NODE_90384_length_243_cov_0.905882_g90143_i0 PRJNA1166865 90384 243 0.905882 2.20129326 Deinococcus sp. QL22 2939437 Bacteria Bacteria 385 1.8999999999999993e-102   NTclustered gi|2238957582|gb|CP097149.1| 2939437 g90143 i0 95.122 227.798353909465 246 8 100 3 1 243 1361741 1361497 Deinococcus sp. QL22 chromosome, complete genome blastn 55355 385 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. QL22
5416858 5416858 PRJNA1166865_P_NODE_78905_length_249_cov_1.130682_g78664_i0 PRJNA1166865 78905 249 1.130682 2.81539818 Deinococcus sp. NW-56 2080419 Bacteria Bacteria 399 6.989999999999999e-107   NTclustered gi|1339790003|gb|CP026516.1| 2080419 g78664 i0 95.582 207.060240963855 249 11 100 0 1 249 543711 543959 Deinococcus sp. NW-56 chromosome, complete genome blastn 51558 399 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. NW-56
21989432 21989432 PRJNA1166865_P_NODE_35938_length_362_cov_1.065744_g35697_i0 PRJNA1166865 35938 362 1.065744 3.85799328 Deinococcota bacterium DY0809b 3396280 Bacteria Bacteria 99 4.35e-16   NTclustered gi|2904223141|gb|CP179936.1| 3396280 g35697 i0 86.667 0.729281767955801 90 11 25 1 22 111 2020265 2020353 Deinococcota bacterium DY0809b chromosome, complete genome blastn 264 99 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium DY0809b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;