RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1166865" and tax_kingdom = "Heunggongvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA1166865 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9241527 9241527 PRJNA1166865_P_NODE_70808_length_260_cov_2.379679_g70567_i0 PRJNA1166865 70808 260 2.379679 6.1871654 Simplexvirus humanalpha1 3050292 Viruses Viruses 54.7 0.007   NTclustered gi|1407524148|gb|MG999872.1| 10298 g70567 i0 100 0.111538461538462 29 0 11 0 93 121 130495 130523 Human alphaherpesvirus 1 strain 2003-15756, partial genome blastn 29 54.7 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1
18165039 18165039 PRJNA1166865_P_NODE_63595_length_277_cov_2.142157_g63354_i0 PRJNA1166865 63595 277 2.142157 5.93377489 Burkholderia phage BCSR5 2805747 Viruses Viruses 67.6 9.1e-7   NTclustered gi|1971775256|gb|MW460245.1| 2805747 g63354 i0 100 0.545126353790614 36 0 13 0 103 138 619 654 Burkholderia phage BCSR5, complete genome blastn 151 67.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Burkholderia phage BCSR5
24539282 24539282 PRJNA1166865_P_NODE_60520_length_284_cov_1.924171_g60279_i0 PRJNA1166865 60520 284 1.924171 5.46464564 Sinorhizobium phage StopSmel 2981545 Viruses Viruses 54.7 0.007   NTclustered gi|2622989299|gb|OR786374.1| 2981545 g60279 i0 96.875 0.112676056338028 32 1 11 0 201 232 26669 26700 Sinorhizobium phage StopSmel, complete genome blastn 32 54.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Sinorhizobium phage StopSmel

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;