RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1164198" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1164198 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
312052 312052 PRJNA1164198_P_NODE_7541_length_456_cov_1.313316_g7280_i0 PRJNA1164198 7541 456 1.313316 5.98872096 Mycotypha africana 64632 Fungi Fungi 217 1.48e-51   NTclustered gi|2432561609|ref|XM_053077210.1| 64632 g7280 i0 80.919 26.7412280701754 283 46 61 8 26 304 115 393 Mycotypha africana 40S ribosomal protein S16 (BDF20DRAFT_816965), partial mRNA blastn 12194 217 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
5415083 5415083 PRJNA1164198_P_NODE_29085_length_245_cov_0.906977_g28816_i0 PRJNA1164198 29085 245 0.906977 2.22209365 Lichtheimia ornata 688661 Fungi Fungi 272 1.56e-68   NTclustered gi|2553588547|ref|XM_058488208.1| 688661 g28816 i0 86.831 199.216326530612 243 32 99 0 1 243 765 523 Lichtheimia ornata polyubiquitin (O0I10_008201), partial mRNA blastn 48808 272 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
7965246 7965246 PRJNA1164198_P_NODE_28527_length_246_cov_0.901734_g28258_i0 PRJNA1164198 28527 246 0.901734 2.21826564 Umbelopsis ramanniana 41833 Fungi Fungi 198 2.7e-46   NTclustered gi|2323685239|ref|XM_051587778.1| 1314678 g28258 i0 84.925 55.7235772357724 199 27 80 3 20 217 1 197 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_233583), partial mRNA blastn 13708 198 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
9239854 9239854 PRJNA1164198_P_NODE_16408_length_305_cov_1.918103_g16139_i0 PRJNA1164198 16408 305 1.918103 5.85021415 Zychaea mexicana 64656 Fungi Fungi 147 1.27e-30   NTclustered gi|2432170872|ref|XM_053127026.1| 64656 g16139 i0 81.522 17.0065573770492 184 29 59 5 42 222 66 247 Zychaea mexicana uncharacterized protein (BDB00DRAFT_872975), partial mRNA blastn 5187 147 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
11790604 11790604 PRJNA1164198_P_NODE_29750_length_244_cov_0.912281_g29481_i0 PRJNA1164198 29750 244 0.912281 2.22596564 Rhizopus microsporus 58291 Fungi Fungi 193 1.24e-44   NTclustered gi|1331194487|ref|XM_023613453.1| 1340429 g29481 i0 82.143 38.5450819672131 224 40 92 0 21 244 214 437 Rhizopus microsporus ATCC 52813 NADH-quinone oxidoreductase (RHIMIDRAFT_287189), partial mRNA blastn 9405 193 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
13065523 13065523 PRJNA1164198_P_NODE_13751_length_334_cov_1.195402_g13482_i0 PRJNA1164198 13751 334 1.195402 3.99264268 Lichtheimia ornata 688661 Fungi Fungi 198 3.82e-46   NTclustered gi|2553553343|ref|XM_058481344.1| 688661 g13482 i0 84.058 11.6047904191617 207 31 62 2 17 222 299 94 Lichtheimia ornata ribosomal protein S8.e (O0I10_001247), partial mRNA blastn 3876 198 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
13065594 13065594 PRJNA1164198_P_NODE_29291_length_244_cov_1.824561_g29022_i0 PRJNA1164198 29291 244 1.824561 4.45192884 Mycotypha africana 64632 Fungi Fungi 222 1.59e-53   NTclustered gi|2432559510|ref|XM_053076877.1| 64632 g29022 i0 84.444 114.946721311475 225 35 92 0 20 244 228 4 Mycotypha africana ubiquitin-60S ribosomal protein L40 (BDF20DRAFT_813442), partial mRNA blastn 28047 222 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;