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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1164198" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1164198 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
311961 311961 PRJNA1164198_P_NODE_17261_length_297_cov_2.727679_g16992_i0 PRJNA1164198 17261 297 2.727679 8.10120663 Soliformovum irregulare 435424 Evosea other_Eukaryota 451 2.33e-122   NTclustered gi|146448863|gb|EF513199.1| 435424 g16992 i0 94.237 85.9292929292929 295 17 99 0 1 295 914 1208 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 25521 451 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
312014 312014 PRJNA1164198_P_NODE_27581_length_247_cov_1.160920_g27312_i0 PRJNA1164198 27581 247 1.16092 2.8674724 Heterostelium pallidum 13642 Evosea other_Eukaryota 233 7.429999999999999e-57   NTclustered gi|160688721|gb|EU275726.1| 13642 g27312 i0 85.088 84.7044534412955 228 34 92 0 13 240 9123 9350 Polysphondylium pallidum strain PN500 mitochondrion, complete genome blastn 20922 233 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium pallidum
4867549 4867549 PRJNA1164198_P_NODE_18224_length_290_cov_1.433180_g17955_i0 PRJNA1164198 18224 290 1.43318 4.156222 Flamella 490353 Evosea other_Eukaryota 536 6.079999999999999e-148   NTclustered gi|163943979|gb|EU186023.1| 490516 g17955 i0 100 78.2862068965517 290 0 100 0 1 290 644 933 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 22703 536 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
11790555 11790555 PRJNA1164198_P_NODE_20350_length_275_cov_1.168317_g20081_i0 PRJNA1164198 20350 275 1.168317 3.21287175 Cavostelium apophysatum 435410 Evosea other_Eukaryota 248 3e-61   NTclustered gi|146448837|gb|EF513185.1| 435410 g20081 i0 83.212 99.2654545454545 274 42 99 4 3 274 1050 779 Cavostelium apophysatum elongation factor 1A (EF1A) gene, partial cds blastn 27298 248 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Cavostelium Cavostelium apophysatum
12518214 12518214 PRJNA1164198_P_NODE_6490_length_494_cov_1.731591_g6231_i0 PRJNA1164198 6490 494 1.731591 8.55405954 Acytostelium 133407 Evosea other_Eukaryota 235 4.4599999999999994e-57   NTclustered gi|355336743|gb|JN048898.1| 361139 g6231 i0 80.769 20.6336032388664 312 50 62 9 188 494 241 547 Acytostelium subglobosum clone ADB0000293 ribosomal protein S2 gene, complete cds blastn 10193 235 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
14340927 14340927 PRJNA1164198_P_NODE_27032_length_248_cov_0.891429_g26763_i0 PRJNA1164198 27032 248 0.891429 2.21074392 Dictyostelium purpureum 5786 Evosea other_Eukaryota 237 5.77e-58   NTclustered gi|330841829|ref|XM_003292845.1| 5786 g26763 i0 84.519 81.8467741935484 239 37 96 0 4 242 248 10 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_73394), mRNA blastn 20298 237 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
19437909 19437909 PRJNA1164198_P_NODE_19536_length_280_cov_1.942029_g19267_i0 PRJNA1164198 19536 280 1.942029 5.4376812 Soliformovum expulsum 435423 Evosea other_Eukaryota 191 5.24e-44   NTclustered gi|260909293|gb|FJ766479.1| 435423 g19267 i0 91.367 29.1714285714286 139 10 50 1 142 280 171 35 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 8168 191 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
24537865 24537865 PRJNA1164198_P_NODE_15880_length_310_cov_2.746835_g15611_i0 PRJNA1164198 15880 310 2.746835 8.5151885 Soliformovum irregulare 435424 Evosea other_Eukaryota 479 1.1199999999999996e-130   NTclustered gi|146448863|gb|EF513199.1| 435424 g15611 i0 94.788 60.3709677419355 307 16 99 0 4 310 616 310 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 18715 479 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;