RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1164198" and tax_clade = "Cyanobacteriota/Melainabacteria group"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 6 ✖

bioproject 1

  • PRJNA1164198 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4867539 4867539 PRJNA1164198_P_NODE_13364_length_339_cov_1.172932_g13095_i0 PRJNA1164198 13364 339 1.172932 3.97623948 Cyanophyceae 3028117 Bacteria Bacteria 534 2.61e-147   NTclustered gi|225696219|gb|FJ805886.1| 259957 g13095 i0 95.266 161.312684365782 338 15 99 1 3 339 2608 2271 Uncultured Chroococcidiopsis sp. clone NA4_4 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 54685 538 0.992565055762082 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis uncultured Chroococcidiopsis sp.
7965192 7965192 PRJNA1164198_P_NODE_18847_length_285_cov_2.547170_g18578_i0 PRJNA1164198 18847 285 2.54717 7.2594345 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 433 8.05e-117   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g18578 i0 94.035 229.961403508772 285 17 100 0 1 285 1477630 1477914 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 65539 433 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
13065515 13065515 PRJNA1164198_P_NODE_11031_length_374_cov_2.199336_g10763_i0 PRJNA1164198 11031 374 2.199336 8.22551664 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 652 0   NTclustered gi|2729058672|emb|OZ006972.1| 2137880 g10763 i0 98.128 101.393048128342 374 7 100 0 1 374 514205 513832 MAG: Candidatus Gastranaerophilales bacterium isolate metabat2_pooled_hifiasm.1023 MAG genome assembly, chromosome: 1 blastn 37921 652 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium
13792809 13792809 PRJNA1164198_P_NODE_20811_length_272_cov_1.482412_g20542_i0 PRJNA1164198 20811 272 1.482412 4.03216064 Bacteria 2 Bacteria Bacteria 470 5.81e-128   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g20542 i0 98.141 574.643382352941 269 5 99 0 1 269 1479307 1479575 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 156303 470 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
23264195 23264195 PRJNA1164198_P_NODE_21539_length_268_cov_1.200000_g21270_i0 PRJNA1164198 21539 268 1.2 3.216 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 254 6.27e-63   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g21270 i0 84.211 327.328358208955 266 36 98 5 1 263 1477003 1477265 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 87724 254 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
23264217 23264217 PRJNA1164198_P_NODE_25759_length_250_cov_1.322034_g25490_i0 PRJNA1164198 25759 250 1.322034 3.305085 Oscillatoria lutea 212356 Bacteria Bacteria 435 1.92e-117   NTclustered gi|1345606792|gb|MG968526.1| 2081949 g25490 i0 98 143.04 250 5 100 0 1 250 710 461 Oscillatoria lutea UTEX B 1814 23S ribosomal RNA gene, partial sequence blastn 35760 435 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Oscillatoriaceae Oscillatoria Oscillatoria lutea

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;