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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA1164198" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 24 ✖

bioproject 1

  • PRJNA1164198 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
311960 311960 PRJNA1164198_P_NODE_17181_length_298_cov_1.448889_g16912_i0 PRJNA1164198 17181 298 1.448889 4.31768922 Cochliopodium minus 313997 Discosea other_Eukaryota 285 2.51e-72   NTclustered gi|1914009695|gb|MT975597.1| 313997 g16912 i0 84 96.6375838926175 300 44 100 4 1 298 44 341 Cochliopodium minus clone 2 actin gene, partial cds blastn 28798 285 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
311961 311961 PRJNA1164198_P_NODE_17261_length_297_cov_2.727679_g16992_i0 PRJNA1164198 17261 297 2.727679 8.10120663 Soliformovum irregulare 435424 Evosea other_Eukaryota 451 2.33e-122   NTclustered gi|146448863|gb|EF513199.1| 435424 g16992 i0 94.237 85.9292929292929 295 17 99 0 1 295 914 1208 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 25521 451 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
312014 312014 PRJNA1164198_P_NODE_27581_length_247_cov_1.160920_g27312_i0 PRJNA1164198 27581 247 1.16092 2.8674724 Heterostelium pallidum 13642 Evosea other_Eukaryota 233 7.429999999999999e-57   NTclustered gi|160688721|gb|EU275726.1| 13642 g27312 i0 85.088 84.7044534412955 228 34 92 0 13 240 9123 9350 Polysphondylium pallidum strain PN500 mitochondrion, complete genome blastn 20922 233 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium pallidum
4867549 4867549 PRJNA1164198_P_NODE_18224_length_290_cov_1.433180_g17955_i0 PRJNA1164198 18224 290 1.43318 4.156222 Flamella 490353 Evosea other_Eukaryota 536 6.079999999999999e-148   NTclustered gi|163943979|gb|EU186023.1| 490516 g17955 i0 100 78.2862068965517 290 0 100 0 1 290 644 933 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 22703 536 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
6689872 6689872 PRJNA1164198_P_NODE_1606_length_963_cov_5.931461_g1438_i0 PRJNA1164198 1606 963 5.931461 57.11996943 Paravannella minima 1443144 Discosea other_Eukaryota 119 9.48e-22   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g1438 i0 79.429 1.9460020768432 175 30 18 5 412 583 2858 2687 Paravannella minima mitochondrion, complete genome blastn 1874 119 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
10515586 10515586 PRJNA1164198_P_NODE_18169_length_290_cov_2.271889_g17900_i0 PRJNA1164198 18169 290 2.271889 6.5884781 Paravannella minima 1443144 Discosea other_Eukaryota 137 7.2099999999999985e-28   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g17900 i0 79.512 42.9 205 33 69 9 30 229 2929 3129 Paravannella minima mitochondrion, complete genome blastn 12441 137 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
11790555 11790555 PRJNA1164198_P_NODE_20350_length_275_cov_1.168317_g20081_i0 PRJNA1164198 20350 275 1.168317 3.21287175 Cavostelium apophysatum 435410 Evosea other_Eukaryota 248 3e-61   NTclustered gi|146448837|gb|EF513185.1| 435410 g20081 i0 83.212 99.2654545454545 274 42 99 4 3 274 1050 779 Cavostelium apophysatum elongation factor 1A (EF1A) gene, partial cds blastn 27298 248 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Cavostelium Cavostelium apophysatum
11790627 11790627 PRJNA1164198_P_NODE_7730_length_450_cov_2.291777_g7468_i0 PRJNA1164198 7730 450 2.291777 10.3129965 Ripella decalvata 2047822 Discosea other_Eukaryota 344 6.419999999999999e-90   NTclustered gi|1269228420|gb|MF683545.1| 2047822 g7468 i0 81.264 101.173333333333 459 56 99 18 5 450 1576 1135 Ripella decalvata clone 26.1.57 18S ribosomal RNA gene, partial sequence blastn 45528 344 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
12518214 12518214 PRJNA1164198_P_NODE_6490_length_494_cov_1.731591_g6231_i0 PRJNA1164198 6490 494 1.731591 8.55405954 Acytostelium 133407 Evosea other_Eukaryota 235 4.4599999999999994e-57   NTclustered gi|355336743|gb|JN048898.1| 361139 g6231 i0 80.769 20.6336032388664 312 50 62 9 188 494 241 547 Acytostelium subglobosum clone ADB0000293 ribosomal protein S2 gene, complete cds blastn 10193 235 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
13065539 13065539 PRJNA1164198_P_NODE_18531_length_288_cov_1.153488_g18262_i0 PRJNA1164198 18531 288 1.153488 3.32204544 Copromyxa sp. PKD 2011 1215977 Tubulinea other_Eukaryota 532 7.8e-147   NTclustered gi|399764167|gb|JQ271678.1| 1215977 g18262 i0 100 95.6493055555556 288 0 100 0 1 288 1436 1723 Copromyxa sp. PKD 2011 strain ZEB1 18S ribosomal RNA gene, partial sequence blastn 27547 532 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa sp. PKD 2011
14340927 14340927 PRJNA1164198_P_NODE_27032_length_248_cov_0.891429_g26763_i0 PRJNA1164198 27032 248 0.891429 2.21074392 Dictyostelium purpureum 5786 Evosea other_Eukaryota 237 5.77e-58   NTclustered gi|330841829|ref|XM_003292845.1| 5786 g26763 i0 84.519 81.8467741935484 239 37 96 0 4 242 248 10 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_73394), mRNA blastn 20298 237 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
14340966 14340966 PRJNA1164198_P_NODE_8972_length_416_cov_1.320700_g8707_i0 PRJNA1164198 8972 416 1.3207 5.494112 Copromyxa protea 931554 Tubulinea other_Eukaryota 603 8.809999999999998e-168   NTclustered gi|508737347|dbj|AB766053.1| 931554 g8707 i0 92.788 26.9254807692308 416 30 100 0 1 416 34 449 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 11201 603 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
15067173 15067173 PRJNA1164198_P_NODE_18592_length_287_cov_2.401869_g18323_i0 PRJNA1164198 18592 287 2.401869 6.89336403 Kanabo 3134259 Root_unresolved Root_unresolved 531 2.799999999999999e-146   NTclustered gi|1750644401|gb|MN508059.1| 2650216 g18323 i0 100 100.689895470383 287 0 100 0 1 287 397 111 Amoebozoa sp. Union16-1-3 small subunit ribosomal RNA gene, partial sequence blastn 28898 531 1 Eukaryota Amoebozoa             Amoebozoa sp. Union16-1-3
15614805 15614805 PRJNA1164198_P_NODE_27913_length_247_cov_0.896552_g27644_i0 PRJNA1164198 27913 247 0.896552 2.21448344 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 339 1.5299999999999998e-88   NTclustered gi|470492676|ref|XM_004345989.1| 1257118 g27644 i0 99.462 14.5384615384615 186 1 75 0 62 247 1674 1489 Acanthamoeba castellanii str. Neff cathepsin Llike proteinase (ACA1_184420), partial mRNA blastn 3591 339 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18163527 18163527 PRJNA1164198_P_NODE_12255_length_355_cov_0.840426_g11987_i0 PRJNA1164198 12255 355 0.840426 2.9835123 Ripella decalvata 2047822 Discosea other_Eukaryota 579 1.2499999999999997e-160   NTclustered gi|1269228411|gb|MF683536.1| 2047822 g11987 i0 96.078 101.36338028169 357 10 100 4 1 355 1130 1484 Ripella decalvata clone 26.1.47 18S ribosomal RNA gene, partial sequence blastn 35984 579 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
18163634 18163634 PRJNA1164198_P_NODE_6435_length_496_cov_5.458629_g6177_i0 PRJNA1164198 6435 496 5.458629 27.07479984 Vannella miroides 218656 Discosea other_Eukaryota 793 0   NTclustered gi|27803574|gb|AY183888.1| 218656 g6177 i0 95.565 97.8286290322581 496 20 100 2 1 496 1436 1929 Vannella miroides small subunit ribosomal RNA gene, complete sequence blastn 48523 793 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella miroides
19437909 19437909 PRJNA1164198_P_NODE_19536_length_280_cov_1.942029_g19267_i0 PRJNA1164198 19536 280 1.942029 5.4376812 Soliformovum expulsum 435423 Evosea other_Eukaryota 191 5.24e-44   NTclustered gi|260909293|gb|FJ766479.1| 435423 g19267 i0 91.367 29.1714285714286 139 10 50 1 142 280 171 35 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 8168 191 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
19437976 19437976 PRJNA1164198_P_NODE_3076_length_716_cov_6.841369_g2852_i0 PRJNA1164198 3076 716 6.841369 48.98420204 Vannella croatica 1778588 Discosea other_Eukaryota 1116 0   NTclustered gi|973761167|gb|KT345693.1| 1778588 g2852 i0 94.832 82.3659217877095 716 36 100 1 1 716 1235 521 Vannella croatica isolate KRKA 29.9.7.6.1 small subunit ribosomal RNA gene, partial sequence blastn 58974 1116 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella croatica
20713275 20713275 PRJNA1164198_P_NODE_13957_length_331_cov_1.810078_g13688_i0 PRJNA1164198 13957 331 1.810078 5.99135818 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 529 1.1799999999999999e-145   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g13688 i0 95.522 67.3897280966767 335 8 100 4 1 331 1200 869 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 22306 529 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
20713344 20713344 PRJNA1164198_P_NODE_28577_length_246_cov_0.901734_g28308_i0 PRJNA1164198 28577 246 0.901734 2.21826564 Thecamoeba sp. JRG-2011 1078868 Discosea other_Eukaryota 279 9.36e-71   NTclustered gi|345452613|gb|JF694325.1| 1078868 g28308 i0 86.992 100.934959349593 246 32 100 0 1 246 538 293 Thecamoeba sp. JRG-2011 strain ATCC 50185 clone 3 actin gene, partial cds blastn 24830 279 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba sp. JRG-2011
23264240 23264240 PRJNA1164198_P_NODE_29279_length_244_cov_1.918129_g29010_i0 PRJNA1164198 29279 244 1.918129 4.68023476 Pyxidicula operculata 1078852 Tubulinea other_Eukaryota 396 8.829999999999997e-106   NTclustered gi|345294028|gb|JF694284.1| 1078852 g29010 i0 95.902 29.6844262295082 244 10 100 0 1 244 189 432 Pyxidicula operculata small subunit ribosomal RNA gene, partial sequence blastn 7243 396 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida   Pyxidicula Pyxidicula operculata
23264253 23264253 PRJNA1164198_P_NODE_6599_length_489_cov_2.810096_g6340_i0 PRJNA1164198 6599 489 2.810096 13.74136944 Ripella sp. 1973050 Discosea other_Eukaryota 375 2.4899999999999997e-99   NTclustered gi|2666517890|gb|PP259001.1| 1973050 g6340 i0 86.188 78.4683026584867 362 32 73 14 57 412 110 459 Ripella sp. strain CHIESE60 small subunit ribosomal RNA gene, partial sequence blastn 38371 375 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp.
24537865 24537865 PRJNA1164198_P_NODE_15880_length_310_cov_2.746835_g15611_i0 PRJNA1164198 15880 310 2.746835 8.5151885 Soliformovum irregulare 435424 Evosea other_Eukaryota 479 1.1199999999999996e-130   NTclustered gi|146448863|gb|EF513199.1| 435424 g15611 i0 94.788 60.3709677419355 307 16 99 0 4 310 616 310 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 18715 479 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
25265821 25265821 PRJNA1164198_P_NODE_9220_length_410_cov_2.459941_g8955_i0 PRJNA1164198 9220 410 2.459941 10.0857581 Ripella 1217112 Discosea other_Eukaryota 612 1.4399999999999996e-170   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g8955 i0 93.917 91.5170731707317 411 15 99 7 4 410 1073 669 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 37522 616 0.993506493506494 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;