contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA1160211" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 309214 | 309214 | PRJNA1160211_S_NODE_134841_length_397_cov_5.685185_g133609_i0 | PRJNA1160211 | 134841 | 397 | 5.685185 | 22.57018445 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 682 | 0 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g133609 | i0 | 99.206 | 231.108312342569 | 378 | 3 | 95 | 0 | 20 | 397 | 179 | 556 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 91750 | 682 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 1584572 | 1584572 | PRJNA1160211_S_NODE_235362_length_274_cov_37.945274_g234129_i0 | PRJNA1160211 | 235362 | 274 | 37.945274 | 103.97005076 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 97.1 | 1.15e-15 | NTclustered | gi|2874253793|emb|OY969777.1| | 412056 | g234129 | i0 | 96.552 | 16.6824817518248 | 58 | 2 | 21 | 0 | 6 | 63 | 2364526 | 2364583 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 | blastn | 4571 | 97.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4136161 | 4136161 | PRJNA1160211_S_NODE_1524_length_1260_cov_4.849200_g1249_i0 | PRJNA1160211 | 1524 | 1260 | 4.8492 | 61.09992 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1242 | 0 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g1249 | i0 | 84.748 | 214.707142857143 | 1272 | 159 | 99 | 27 | 13 | 1260 | 914602 | 915862 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 270531 | 1242 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 7962964 | 7962964 | PRJNA1160211_S_NODE_205047_length_305_cov_2.409483_g203814_i0 | PRJNA1160211 | 205047 | 305 | 2.409483 | 7.34892315 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 195 | 4.46e-45 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g203814 | i0 | 83.028 | 11.3245901639344 | 218 | 33 | 71 | 2 | 1 | 216 | 5049096 | 5049311 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 3454 | 195 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 9238248 | 9238248 | PRJNA1160211_S_NODE_288908_length_233_cov_3.431250_g287675_i0 | PRJNA1160211 | 288908 | 233 | 3.43125 | 7.9948125 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 193 | 1.18e-44 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g287675 | i0 | 83.495 | 31.9356223175966 | 206 | 34 | 88 | 0 | 5 | 210 | 1862256 | 1862461 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 7441 | 193 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 10513321 | 10513321 | PRJNA1160211_S_NODE_186689_length_326_cov_3.786561_g185456_i0 | PRJNA1160211 | 186689 | 326 | 3.786561 | 12.34418886 | Verrucomicrobia bacterium IMCC26134 | 1637999 | Bacteria | Bacteria | 464 | 3.3199999999999997e-126 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g185456 | i0 | 94.137 | 96.2760736196319 | 307 | 14 | 93 | 3 | 1 | 303 | 1903206 | 1903512 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 31386 | 464 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 10514519 | 10514519 | PRJNA1160211_S_NODE_8729_length_839_cov_36.154047_g8000_i0 | PRJNA1160211 | 8729 | 839 | 36.154047 | 303.33245433 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 1027 | 0 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g8000 | i0 | 88.797 | 277.014302741359 | 848 | 81 | 100 | 14 | 1 | 839 | 1053 | 1895 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 232415 | 1027 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 11242225 | 11242225 | PRJNA1160211_S_NODE_59209_length_549_cov_21.611345_g58025_i0 | PRJNA1160211 | 59209 | 549 | 21.611345 | 118.64628405 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 676 | 0 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g58025 | i0 | 90.945 | 93.9508196721311 | 508 | 39 | 92 | 7 | 28 | 531 | 1 | 505 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 51579 | 680 | 0.994117647058824 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 11788274 | 11788274 | PRJNA1160211_S_NODE_18950_length_717_cov_5.402174_g17967_i0 | PRJNA1160211 | 18950 | 717 | 5.402174 | 38.73358758 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 800 | 0 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g17967 | i0 | 87.732 | 233.417015341702 | 701 | 66 | 97 | 17 | 1 | 692 | 2749713 | 2750402 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 167360 | 800 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 11789329 | 11789329 | PRJNA1160211_S_NODE_68850_length_524_cov_11.208426_g67645_i0 | PRJNA1160211 | 68850 | 524 | 11.208426 | 58.73215224 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 470 | 1.2e-127 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g67645 | i0 | 83.694 | 116.931297709924 | 509 | 71 | 96 | 11 | 1 | 501 | 3861535 | 3861031 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 61272 | 470 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 15613206 | 15613206 | PRJNA1160211_S_NODE_37313_length_620_cov_5.177331_g36184_i0 | PRJNA1160211 | 37313 | 620 | 5.177331 | 32.0994522 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 865 | 0 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g36184 | i0 | 91.909 | 252.390322580645 | 618 | 50 | 99 | 0 | 3 | 620 | 2748423 | 2749040 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 156482 | 865 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15613281 | 15613281 | PRJNA1160211_S_NODE_4873_length_952_cov_10.001138_g4311_i0 | PRJNA1160211 | 4873 | 952 | 10.001138 | 95.21083376 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 606 | 1.6399999999999992e-168 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g4311 | i0 | 80.278 | 94.9884453781513 | 862 | 123 | 86 | 30 | 46 | 868 | 3833000 | 3832147 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 90429 | 606 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18162539 | 18162539 | PRJNA1160211_S_NODE_98295_length_460_cov_21.279070_g97070_i0 | PRJNA1160211 | 98295 | 460 | 21.27907 | 97.883722 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 784 | 0 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g97070 | i0 | 99.083 | 224.363043478261 | 436 | 4 | 95 | 0 | 1 | 436 | 613 | 178 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 103207 | 784 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 18890489 | 18890489 | PRJNA1160211_S_NODE_51775_length_571_cov_1.819277_g50608_i0 | PRJNA1160211 | 51775 | 571 | 1.819277 | 10.38807167 | Chthoniobacter | 295577 | Bacteria | Bacteria | 767 | 0 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g50608 | i0 | 91.848 | 217.141856392294 | 552 | 41 | 96 | 2 | 1 | 548 | 15915 | 15364 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 123988 | 771 | 0.994811932555123 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 19436307 | 19436307 | PRJNA1160211_S_NODE_291396_length_229_cov_14.237179_g290163_i0 | PRJNA1160211 | 291396 | 229 | 14.237179 | 32.60313991 | Horticoccus luteus | 2862869 | Bacteria | Bacteria | 187 | 5.37e-43 | NTclustered | gi|2077391884|gb|CP080507.1| | 2862869 | g290163 | i0 | 85.106 | 3.14847161572052 | 188 | 22 | 80 | 4 | 25 | 207 | 2448317 | 2448503 | Horticoccus luteus strain KSB-15 chromosome, complete genome | blastn | 721 | 187 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Horticoccus | Horticoccus luteus | |
| 20710869 | 20710869 | PRJNA1160211_S_NODE_168377_length_349_cov_6.956522_g167144_i0 | PRJNA1160211 | 168377 | 349 | 6.956522 | 24.27826178 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 433 | 1.0099999999999999e-116 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g167144 | i0 | 90.826 | 137.315186246418 | 327 | 25 | 93 | 4 | 27 | 349 | 557371 | 557696 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 47923 | 433 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 20711983 | 20711983 | PRJNA1160211_S_NODE_57757_length_553_cov_172.768750_g56577_i0 | PRJNA1160211 | 57757 | 553 | 172.76875 | 955.4111875 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 588 | 3.36e-163 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g56577 | i0 | 87.354 | 71.8915009041591 | 514 | 63 | 93 | 2 | 19 | 530 | 3833088 | 3833601 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 39756 | 588 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21986302 | 21986302 | PRJNA1160211_S_NODE_183878_length_329_cov_18.242188_g182645_i0 | PRJNA1160211 | 183878 | 329 | 18.242188 | 60.01679852 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 305 | 2.15e-78 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g182645 | i0 | 84.79 | 124.31914893617 | 309 | 41 | 93 | 6 | 23 | 329 | 15372 | 15676 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 40901 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 22715278 | 22715278 | PRJNA1160211_S_NODE_173038_length_343_cov_5.418519_g171805_i0 | PRJNA1160211 | 173038 | 343 | 5.418519 | 18.58552017 | Prosthecobacter | 48463 | Bacteria | Bacteria | 484 | 2.7e-132 | NTclustered | gi|183579826|emb|AM905423.1| | 48465 | g171805 | i0 | 93.789 | 56.801749271137 | 322 | 20 | 94 | 0 | 22 | 343 | 1195 | 1516 | Prosthecobacter dejongeii partial 23S rRNA gene, strain DSM12251 | blastn | 19483 | 484 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter dejongeii | |
| 22716035 | 22716035 | PRJNA1160211_S_NODE_94498_length_468_cov_4.167089_g93273_i0 | PRJNA1160211 | 94498 | 468 | 4.167089 | 19.50197652 | Prosthecobacter | 48463 | Bacteria | Bacteria | 791 | 0 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g93273 | i0 | 98.022 | 247.155982905983 | 455 | 9 | 97 | 0 | 7 | 461 | 794 | 1248 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 115669 | 791 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 23261092 | 23261092 | PRJNA1160211_S_NODE_100459_length_456_cov_6.550914_g99233_i0 | PRJNA1160211 | 100459 | 456 | 6.550914 | 29.87216784 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 562 | 1.65e-155 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g99233 | i0 | 90.183 | 157.142543859649 | 438 | 34 | 96 | 8 | 20 | 456 | 16800 | 17229 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 71657 | 562 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 23262356 | 23262356 | PRJNA1160211_S_NODE_265499_length_250_cov_1.305085_g264266_i0 | PRJNA1160211 | 265499 | 250 | 1.305085 | 3.2627125 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 250 | 7.48e-62 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g264266 | i0 | 84.706 | 33.812 | 255 | 33 | 100 | 6 | 1 | 250 | 2749555 | 2749808 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 8453 | 250 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 23262510 | 23262510 | PRJNA1160211_S_NODE_289659_length_232_cov_3.012579_g288426_i0 | PRJNA1160211 | 289659 | 232 | 3.012579 | 6.98918328 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 263 | 8.8e-66 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g288426 | i0 | 89.151 | 51.3577586206897 | 212 | 21 | 91 | 2 | 23 | 232 | 1407 | 1618 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 11915 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 24535800 | 24535800 | PRJNA1160211_S_NODE_22140_length_695_cov_7.490354_g21116_i0 | PRJNA1160211 | 22140 | 695 | 7.490354 | 52.0579603 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 931 | 0 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g21116 | i0 | 91.904 | 169.348201438849 | 667 | 53 | 97 | 1 | 18 | 684 | 1727337 | 1728002 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 117697 | 931 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;