contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA1160211" and tax_phylum = "Rotifera"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3589300 | 3589300 | PRJNA1160211_S_NODE_299023_length_206_cov_20.060150_g297790_i0 | PRJNA1160211 | 299023 | 206 | 20.06015 | 41.323909 | Ploima | 84394 | Rotifera | other_Eukaryota | 331 | 2.0700000000000002e-86 | NTclustered | gi|259090060|gb|GQ503608.1| | 204738 | g297790 | i0 | 98.919 | 89.7621359223301 | 185 | 2 | 90 | 0 | 1 | 185 | 373 | 189 | Keratella cochlearis 18S ribosomal RNA gene, partial sequence | blastn | 18491 | 331 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Brachionidae | Keratella | Keratella cochlearis | |
| 4137151 | 4137151 | PRJNA1160211_S_NODE_285124_length_238_cov_8.412121_g283891_i0 | PRJNA1160211 | 285124 | 238 | 8.412121 | 20.02084798 | Philodina roseola | 96448 | Rotifera | other_Eukaryota | 222 | 1.54e-53 | NTclustered | gi|187936070|gb|EU652317.1| | 96448 | g283891 | i0 | 84.348 | 25.6176470588235 | 230 | 32 | 96 | 4 | 11 | 238 | 19620 | 19847 | Philodina roseola GTP binding protein, beta prime coatomer protein complex subunit, GPCR, beta-transducin repeat containing protein, speckle-type POZ protein, adenosine kinase, prefoldin subunit 1, translation initiation factor eIF-4E, Rho GTPase activating protein, histone H4, histone H3, histone H2B, histone H2Av, cleft lip and palate associated transmembrane protein, mitochondrial ribosomal protein s22, ribosomal protein s15a, hypothetical protein 20, START domain containing protein, and filament protein genes, complete cds | blastn | 6097 | 222 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Philodinida | Philodinidae | Philodina | Philodina roseola | |
| 5412664 | 5412664 | PRJNA1160211_S_NODE_194165_length_317_cov_6.094262_g192932_i0 | PRJNA1160211 | 194165 | 317 | 6.094262 | 19.31881054 | Philodina roseola | 96448 | Rotifera | other_Eukaryota | 494 | 4.1099999999999997e-135 | NTclustered | gi|37785582|gb|AY210469.1| | 96448 | g192932 | i0 | 96.939 | 42.6403785488959 | 294 | 9 | 93 | 0 | 24 | 317 | 2194 | 2487 | Philodina roseola 28S ribosomal RNA gene, partial sequence | blastn | 13517 | 494 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Philodinida | Philodinidae | Philodina | Philodina roseola | |
| 6687298 | 6687298 | PRJNA1160211_S_NODE_157246_length_364_cov_16.563574_g156013_i0 | PRJNA1160211 | 157246 | 364 | 16.563574 | 60.29140936 | Adineta vaga | 104782 | Rotifera | other_Eukaryota | 582 | 9.9e-162 | NTclustered | gi|259129963|gb|GQ398061.1| | 104782 | g156013 | i0 | 99.686 | 4.7032967032967 | 318 | 1 | 87 | 0 | 1 | 318 | 9989 | 10306 | Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 1712 | 582 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Adinetida | Adinetidae | Adineta | Adineta vaga | |
| 13791742 | 13791742 | PRJNA1160211_S_NODE_193511_length_318_cov_3.567347_g192278_i0 | PRJNA1160211 | 193511 | 318 | 3.567347 | 11.34416346 | Asplanchna | 84396 | Rotifera | other_Eukaryota | 246 | 1.2699999999999999e-60 | NTclustered | gi|2899343712|gb|PQ788833.1| | 2005548 | g192278 | i0 | 84.462 | 31.4874213836478 | 251 | 37 | 79 | 1 | 47 | 297 | 2123 | 2371 | Asplanchna brightwellii chromosome I mitochondrion, complete sequence | blastn | 10013 | 246 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Ploima | Asplanchnidae | Asplanchna | Asplanchna brightwellii | |
| 19436804 | 19436804 | PRJNA1160211_S_NODE_86656_length_484_cov_4.301703_g85436_i0 | PRJNA1160211 | 86656 | 484 | 4.301703 | 20.82024252 | Macrotrachela quadricornifera | 104788 | Rotifera | other_Eukaryota | 560 | 6.34e-155 | NTclustered | gi|402761731|gb|JX183997.1| | 104788 | g85436 | i0 | 88 | 83.3367768595041 | 475 | 55 | 98 | 1 | 11 | 483 | 305 | 779 | Macrotrachela quadricornifera isolate HR cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial | blastn | 40335 | 560 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Philodinida | Philodinidae | Macrotrachela | Macrotrachela quadricornifera | |
| 21440342 | 21440342 | PRJNA1160211_S_NODE_195877_length_315_cov_5.847107_g194644_i0 | PRJNA1160211 | 195877 | 315 | 5.847107 | 18.41838705 | Eurotatoria | 2816136 | Rotifera | other_Eukaryota | 529 | 1.1199999999999997e-145 | NTclustered | gi|72153672|gb|DQ089733.1| | 104782 | g194644 | i0 | 99.315 | 91.4857142857143 | 292 | 2 | 93 | 0 | 1 | 292 | 388 | 97 | Adineta vaga 18S ribosomal RNA gene, complete sequence | blastn | 28818 | 529 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Adinetida | Adinetidae | Adineta | Adineta vaga | |
| 21985952 | 21985952 | PRJNA1160211_S_NODE_136638_length_394_cov_9.408100_g135406_i0 | PRJNA1160211 | 136638 | 394 | 9.4081 | 37.067914 | Adineta vaga | 104782 | Rotifera | other_Eukaryota | 206 | 2.7299999999999994e-48 | NTclustered | gi|187233667|gb|EU643500.1| | 104782 | g135406 | i0 | 83.333 | 10.005076142132 | 222 | 37 | 56 | 0 | 22 | 243 | 403 | 624 | Adineta vaga ribosomal protein L11 mRNA, partial cds | blastn | 3942 | 206 | 1 | Eukaryota | Opisthokonta | Metazoa | Rotifera | Eurotatoria | Adinetida | Adinetidae | Adineta | Adineta vaga |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;