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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA1160211" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1160211 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2860085 2860085 PRJNA1160211_S_NODE_138603_length_391_cov_9.320755_g137371_i0 PRJNA1160211 138603 391 9.320755 36.44415205 Radiomyces spectabilis 64574 Fungi Fungi 196 1.63e-45   NTclustered gi|2323737211|ref|XM_051571137.1| 64574 g137371 i0 85.946 39.8874680306905 185 24 47 2 1 184 270 453 Radiomyces spectabilis histone (BYT42DRAFT_606005), mRNA blastn 15596 196 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
2860162 2860162 PRJNA1160211_S_NODE_146503_length_379_cov_40.640523_g145270_i0 PRJNA1160211 146503 379 40.640523 154.02758217 Rhizopus stolonifer 4846 Fungi Fungi 658 0   NTclustered gi|380865584|gb|JQ606829.1| 4846 g145270 i0 100 91.8970976253298 356 0 94 0 24 379 114 469 Rhizopus stolonifer strain NRRL A-17183 internal transcribed spacer 2 and 28S ribosomal RNA gene, partial sequence blastn 34829 658 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
4136234 4136234 PRJNA1160211_S_NODE_161044_length_359_cov_4.692308_g159811_i0 PRJNA1160211 161044 359 4.692308 16.84538572 uncultured Acaulosporaceae 467201 Fungi Fungi 119 3.3100000000000003e-22   NTclustered gi|523473549|gb|KF206444.1| 467201 g159811 i0 84.874 8.98328690807799 119 17 33 1 87 205 1057 940 Uncultured Acaulosporaceae clone Gra-11 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3225 119 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Acaulosporaceae   uncultured Acaulosporaceae
5412965 5412965 PRJNA1160211_S_NODE_233385_length_276_cov_5.463054_g232152_i0 PRJNA1160211 233385 276 5.463054 15.07802904 Mucor indicus 64623 Fungi Fungi 78.7 4.19e-10   NTclustered gi|2627921281|ref|NC_084441.1| 64623 g232152 i0 88.06 0.489130434782609 67 6 24 2 181 246 12953 13018 Mucor indicus mitochondrion, complete genome blastn 135 78.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor indicus
6687297 6687297 PRJNA1160211_S_NODE_157226_length_364_cov_24.189003_g155993_i0 PRJNA1160211 157226 364 24.189003 88.04797092 Rhizopus microsporus 58291 Fungi Fungi 610 4.539999999999998e-170   NTclustered gi|2181828649|gb|OM337564.1| 58291 g155993 i0 98.555 91.8901098901099 346 4 95 1 1 345 1109 764 Rhizopus microsporus strain ATCC 11559 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33448 610 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
9966213 9966213 PRJNA1160211_S_NODE_108228_length_441_cov_286.595109_g107000_i0 PRJNA1160211 108228 441 286.595109 1263.88443069 Fungi 4751 Fungi Fungi 701 0   NTclustered gi|81238811|gb|DQ263907.1| 260090 g107000 i0 97.356 94.3174603174603 416 3 94 1 26 441 34 441 Uncultured glomeraceous AM fungus clone 1687_5 18S ribosomal RNA gene, partial sequence blastn 41594 706 0.992917847025496 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae   uncultured glomeraceous AM fungus
11788900 11788900 PRJNA1160211_S_NODE_281730_length_241_cov_9.684524_g280497_i0 PRJNA1160211 281730 241 9.684524 23.33970284 uncultured Glomeromycotina 241622 Fungi Fungi 76.8 1.29e-9   NTclustered gi|426204880|gb|JX848960.1| 241622 g280497 i0 86.957 15.0912863070539 69 8 29 1 6 74 648 581 Uncultured Glomeromycota clone 11H_Plate1 28S large subunit ribosomal gene, partial sequence blastn 3637 76.8 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
17616313 17616313 PRJNA1160211_S_NODE_231314_length_278_cov_4.151220_g230081_i0 PRJNA1160211 231314 278 4.15122 11.5403916 Fungi 4751 Fungi Fungi 287 6.44e-73   NTclustered gi|658131632|emb|HF968958.1| 4874 g230081 i0 91.787 111.053956834532 207 16 84 1 49 255 2202 1997 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 30873 287 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
20165047 20165047 PRJNA1160211_S_NODE_273956_length_245_cov_13.500000_g272723_i0 PRJNA1160211 273956 245 13.5 33.075 Fungi 4751 Fungi Fungi 394 3.189999999999999e-105   NTclustered gi|358001175|gb|JN938898.1| 4841 g272723 i0 98.649 90.6489795918367 222 3 91 0 1 222 298 77 Mucor racemosus strain DAOM 229663 28S ribosomal RNA (LSU) gene, partial sequence blastn 22209 394 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
20711583 20711583 PRJNA1160211_S_NODE_270017_length_247_cov_18.706897_g268784_i0 PRJNA1160211 270017 247 18.706897 46.20603559 Mortierella sp. 1 HMH-2015 1775751 Fungi Fungi 411 3.199999999999999e-110   NTclustered gi|973446306|gb|KP744396.1| 1775751 g268784 i0 99.123 92.2064777327935 228 2 92 0 20 247 44 271 Mortierella sp. 1 HMH-2015 strain TEFA5 28S ribosomal RNA gene, partial sequence blastn 22775 411 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella sp. 1 HMH-2015
23990704 23990704 PRJNA1160211_S_NODE_207259_length_302_cov_46.834061_g206026_i0 PRJNA1160211 207259 302 46.834061 141.43886422 Fungi 4751 Fungi Fungi 340 5.3599999999999996e-89   NTclustered gi|658131632|emb|HF968958.1| 4874 g206026 i0 89.888 60.2086092715232 267 24 88 3 12 277 2266 2002 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 18183 340 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
24535473 24535473 PRJNA1160211_S_NODE_174280_length_342_cov_1.078067_g173047_i0 PRJNA1160211 174280 342 1.078067 3.68698914 Racocetra fulgida 60492 Fungi Fungi 69.4 3.21e-7   NTclustered gi|2515427707|gb|OR103805.1| 60492 g173047 i0 95.349 0.125730994152047 43 2 13 0 190 232 1390 1432 Racocetra fulgida clone MD126.II.3.Q11Pis48 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 43 69.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Racocetra Racocetra fulgida
24535950 24535950 PRJNA1160211_S_NODE_244080_length_267_cov_1.190722_g242847_i0 PRJNA1160211 244080 267 1.190722 3.17922774 Halteromyces radiatus 101107 Fungi Fungi 339 1.6699999999999998e-88   NTclustered gi|2323745966|ref|XM_051549385.1| 101107 g242847 i0 90.31 2.8689138576779 258 25 97 0 10 267 696 953 Halteromyces radiatus 30S ribosomal protein S7e (BX664DRAFT_387386), mRNA blastn 766 339 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;