RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1160211" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1160211 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7962515 7962515 PRJNA1160211_S_NODE_150667_length_374_cov_0.933555_g149434_i0 PRJNA1160211 150667 374 0.933555 3.4914957 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 80.5 1.63e-10   NTclustered gi|2037969038|ref|XM_041596501.1| 7654 g149434 i0 75.41 2.77272727272727 183 35 47 7 196 372 505 327 PREDICTED: Lytechinus variegatus late histone H2A.2.2-like (LOC121405574), mRNA blastn 1037 80.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
9237711 9237711 PRJNA1160211_S_NODE_210148_length_299_cov_10.075221_g208915_i0 PRJNA1160211 210148 299 10.075221 30.12491079 Encope aberrans 39301 Echinodermata other_Eukaryota 58.4 5.98e-4   NTclustered gi|665628|emb|Z37126.1| 39301 g208915 i0 97.059 4.80936454849498 34 1 11 0 1 34 290 323 E.aberrans gene for 18S ribosomal RNA blastn 1438 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Clypeasteroida Mellitidae Encope Encope aberrans
13063923 13063923 PRJNA1160211_S_NODE_293571_length_226_cov_4.529412_g292338_i0 PRJNA1160211 293571 226 4.529412 10.23647112 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 52.8 0.02   NTclustered gi|2037964455|ref|XM_041627755.1| 7654 g292338 i0 100 1.36283185840708 28 0 12 0 37 64 8202 8229 PREDICTED: Lytechinus variegatus uncharacterized LOC121430484 (LOC121430484), transcript variant X3, mRNA blastn 308 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
18161745 18161745 PRJNA1160211_S_NODE_257595_length_256_cov_1.038251_g256362_i0 PRJNA1160211 257595 256 1.038251 2.65792256 Anneissia japonica 1529436 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|1826658637|ref|XM_033261216.1| 1529436 g256362 i0 88.889 2.0078125 45 5 18 0 147 191 1130 1086 PREDICTED: Anneissia japonica late histone H2A.2.2-like (LOC117117037), mRNA blastn 514 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
18161852 18161852 PRJNA1160211_S_NODE_277715_length_244_cov_0.865497_g276482_i0 PRJNA1160211 277715 244 0.865497 2.11181268 Asterias rubens 7604 Echinodermata other_Eukaryota 58.4 4.73e-4   NTclustered gi|1834271394|ref|XM_033781795.1| 7604 g276482 i0 100 0.127049180327869 31 0 13 0 125 155 1206 1176 PREDICTED: Asterias rubens motile sperm domain-containing protein 1-like (LOC117298507), mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;