contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1160211" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5412155 | 5412155 | PRJNA1160211_S_NODE_123485_length_415_cov_6.921053_g122256_i0 | PRJNA1160211 | 123485 | 415 | 6.921053 | 28.72236995 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 431 | 4.39e-116 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g122256 | i0 | 86.945 | 359.681927710843 | 383 | 50 | 92 | 0 | 10 | 392 | 173745 | 173363 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 149268 | 431 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 6688774 | 6688774 | PRJNA1160211_S_NODE_866_length_1453_cov_24.929710_g672_i0 | PRJNA1160211 | 866 | 1453 | 24.92971 | 362.2286863 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 2056 | 0 | NTclustered | gi|2874253890|emb|OY970065.1| | 2052178 | g672 | i0 | 92.727 | 159.966276668961 | 1430 | 95 | 98 | 6 | 3 | 1430 | 627413 | 625991 | MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1 | blastn | 232431 | 2056 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 6688779 | 6688779 | PRJNA1160211_S_NODE_87166_length_483_cov_4.221951_g85944_i0 | PRJNA1160211 | 87166 | 483 | 4.221951 | 20.39202333 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 536 | 1.07e-147 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g85944 | i0 | 87.716 | 135.995859213251 | 464 | 51 | 95 | 6 | 1 | 460 | 654942 | 655403 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 65686 | 536 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 9237168 | 9237168 | PRJNA1160211_S_NODE_137468_length_393_cov_4.503125_g136236_i0 | PRJNA1160211 | 137468 | 393 | 4.503125 | 17.69728125 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 518 | 3.08e-142 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g136236 | i0 | 92.12 | 107.40203562341 | 368 | 27 | 93 | 2 | 1 | 367 | 1249984 | 1249618 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 42209 | 518 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 9238825 | 9238825 | PRJNA1160211_S_NODE_908_length_1435_cov_19.321586_g672_i1 | PRJNA1160211 | 908 | 1435 | 19.321586 | 277.2647591 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 1945 | 0 | NTclustered | gi|2874253890|emb|OY970065.1| | 2052178 | g672 | i1 | 91.538 | 157.819512195122 | 1430 | 94 | 98 | 7 | 24 | 1433 | 625991 | 627413 | MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1 | blastn | 226471 | 1945 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 12517793 | 12517793 | PRJNA1160211_S_NODE_93830_length_469_cov_9.666667_g92605_i0 | PRJNA1160211 | 93830 | 469 | 9.666667 | 45.33666823 | Parachlamydiales | 1963360 | Bacteria | Bacteria | 320 | 1.1299999999999999e-82 | NTclustered | gi|31747861|gb|AY140910.1| | 206681 | g92605 | i0 | 81.446 | 157.008528784648 | 415 | 55 | 88 | 18 | 35 | 445 | 8028 | 7632 | Candidatus Fritschea bemisiae strain Falk YaeL (yaeL) gene, partial cds; putative glycosylhydrolase and putative transposase genes, complete cds; 16S ribosomal RNA and 23S ribosomal RNA genes, complete sequence; putative endonuclease gene, complete cds; 5S ribosomal RNA gene, complete sequence; argynyl tRNA synthetase (argS), YjeE (yjeE), probable GTP-binding protein, DNA polymerase III epsilon subunit, and phosphoglycerate kinase (pgk) genes, complete cds; and unknown gene | blastn | 73637 | 322 | 0.993788819875776 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Candidatus Fritschea | Candidatus Fritschea bemisiae | |
| 13064088 | 13064088 | PRJNA1160211_S_NODE_44271_length_594_cov_62.587332_g43117_i0 | PRJNA1160211 | 44271 | 594 | 62.587332 | 371.76875208 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 929 | 0 | NTclustered | gi|2874253890|emb|OY970065.1| | 2052178 | g43117 | i0 | 96.134 | 101.656565656566 | 569 | 22 | 96 | 0 | 1 | 569 | 624713 | 624145 | MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1 | blastn | 60384 | 929 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 18161695 | 18161695 | PRJNA1160211_S_NODE_251535_length_260_cov_6.048128_g250302_i0 | PRJNA1160211 | 251535 | 260 | 6.048128 | 15.7251328 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 307 | 4.58e-79 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g250302 | i0 | 90.598 | 109.273076923077 | 234 | 19 | 89 | 3 | 7 | 237 | 655170 | 655403 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 28411 | 307 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 20165182 | 20165182 | PRJNA1160211_S_NODE_36836_length_622_cov_4.535519_g35709_i0 | PRJNA1160211 | 36836 | 622 | 4.535519 | 28.21092818 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 926 | 0 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g35709 | i0 | 93.559 | 176.509646302251 | 621 | 40 | 99 | 0 | 1 | 621 | 1250557 | 1249937 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 109789 | 926 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 24536554 | 24536554 | PRJNA1160211_S_NODE_56320_length_557_cov_54.855372_g55143_i0 | PRJNA1160211 | 56320 | 557 | 54.855372 | 305.54442204 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 599 | 1.5599999999999993e-166 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g55143 | i0 | 88.008 | 101.614003590664 | 517 | 49 | 92 | 9 | 22 | 534 | 1249580 | 1249073 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 56599 | 599 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;