RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA1160211" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA1160211 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
310244 310244 PRJNA1160211_S_NODE_276361_length_244_cov_2.584795_g275128_i0 PRJNA1160211 276361 244 2.584795 6.3068998 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 180 9.68e-41   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g275128 i0 81.651 1.40163934426229 218 38 89 2 17 233 793786 793570 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 342 180 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
1585493 1585493 PRJNA1160211_S_NODE_91522_length_474_cov_4.206983_g90299_i0 PRJNA1160211 91522 474 4.206983 19.94109942 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 732 0   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g90299 i0 94.538 182.761603375527 476 23 99 3 1 473 891281 890806 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 86629 732 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
15066470 15066470 PRJNA1160211_S_NODE_297232_length_214_cov_4.042553_g295999_i0 PRJNA1160211 297232 214 4.042553 8.65106342 Bacteria 2 Bacteria Bacteria 54.7 0.005   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g295999 i0 96.97 15.6682242990654 33 0 15 1 177 208 774596 774628 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 3353 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
16887420 16887420 PRJNA1160211_S_NODE_284034_length_240_cov_3.227545_g282801_i0 PRJNA1160211 284034 240 3.227545 7.746108 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 182 2.64e-41   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g282801 i0 80.579 1.00833333333333 242 42 99 4 1 238 793590 793350 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 242 182 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
21987256 21987256 PRJNA1160211_S_NODE_45858_length_589_cov_25.784884_g44702_i0 PRJNA1160211 45858 589 25.784884 151.87296676 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 734 0   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g44702 i0 90.175 95.7758913412564 570 47 96 9 1 566 890380 889816 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 56412 734 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;