RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA1160211" and tax_kingdom = "Helvetiavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Helvetiavirae · 1 ✖

bioproject 1

  • PRJNA1160211 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18161512 18161512 PRJNA1160211_S_NODE_225295_length_284_cov_2.341232_g224062_i0 PRJNA1160211 225295 284 2.341232 6.64909888 Hukuchivirus IN93 2844981 Viruses Viruses 366 8.24e-97   NTclustered gi|227215235|dbj|AB063393.2| 1714273 g224062 i0 97.222 1.52112676056338 216 6 76 0 47 262 12746 12961 Thermus thermophilus phage IN93 DNA, complete genome blastn 432 366 1 Viruses   Helvetiavirae Dividoviricota Laserviricetes Halopanivirales Matsushitaviridae Hukuchivirus Hukuchivirus IN93

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;