RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1160211" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1160211 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1038122 1038122 PRJNA1160211_S_NODE_117861_length_425_cov_2.559659_g116632_i0 PRJNA1160211 117861 425 2.559659 10.87855075 root 1 Root_unresolved Root_unresolved 734 0   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g116632 i0 99.505 95.0588235294118 404 1 95 1 22 425 4057 3655 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 40400 741 0.99055330634278 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8691609 8691609 PRJNA1160211_S_NODE_26007_length_673_cov_2.710000_g24934_i0 PRJNA1160211 26007 673 2.71 18.2383 root 1 Root_unresolved Root_unresolved 737 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g24934 i0 100 91.1679049034175 399 0 91 0 62 460 1627 1229 Unidentified adenovirus strain CHOP Ad5 blastn 61356 737 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
10513158 10513158 PRJNA1160211_S_NODE_161489_length_358_cov_70.164912_g160256_i0 PRJNA1160211 161489 358 70.164912 251.19038496 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.034   NTclustered gi|9964314|ref|NC_002520.1| 28321 g160256 i0 94.286 0.0977653631284916 35 1 9 1 108 141 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;