RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1159911" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1159911 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
308174 308174 PRJNA1159911_P_NODE_62081_length_304_cov_1.779221_g61539_i0 PRJNA1159911 62081 304 1.779221 5.40883184 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 124 5.919999999999999e-24   NTclustered gi|2782925344|ref|XM_067072791.1| 252671 g61539 i0 91.209 1.53947368421053 91 8 31 0 69 159 3289 3199 PREDICTED: Clytia hemisphaerica protein transport protein Sec31A-like (LOC136816463), transcript variant X2, mRNA blastn 468 124 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
6685606 6685606 PRJNA1159911_P_NODE_39646_length_405_cov_1.710843_g39104_i0 PRJNA1159911 39646 405 1.710843 6.92891415 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.039   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g39104 i0 100 0.0691358024691358 28 0 7 0 228 255 7069975 7069948 Anemonia sulcata genome assembly, chromosome: 18 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
11786970 11786970 PRJNA1159911_P_NODE_70050_length_283_cov_2.414286_g69508_i0 PRJNA1159911 70050 283 2.414286 6.83242938 Eunicella cavolini 317547 Cnidaria other_Eukaryota 207 5.27e-49   NTclustered gi|2918369552|emb|OZ237724.1| 317547 g69508 i0 82.627 6.50883392226148 236 39 83 2 11 245 198087 197853 Eunicella cavolini genome assembly, chromosome: 8 blastn 1842 207 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;