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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1159911" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 12 ✖

bioproject 1

  • PRJNA1159911 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6684997 6684997 PRJNA1159911_P_NODE_100846_length_241_cov_0.916667_g100304_i0 PRJNA1159911 100846 241 0.916667 2.20916747 Dunaliella viridis 140095 Plants Plants 302 1.95e-77   NTclustered gi|109692964|gb|DQ641395.1| 140095 g100304 i0 89.344 1.99585062240664 244 20 100 6 1 241 12201 11961 Dunaliella viridis hypothetical protein genes, complete cds blastn 481 302 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella viridis
7961580 7961580 PRJNA1159911_P_NODE_73007_length_277_cov_1.132353_g72465_i0 PRJNA1159911 73007 277 1.132353 3.13661781 Chlamydomonas reinhardtii 3055 Plants Plants 56.5 0.002   NTclustered gi|2082265983|ref|XM_043070553.1| 3055 g72465 i0 100 0.108303249097473 30 0 11 0 36 65 1930 1901 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_15g637100v5), mRNA blastn 30 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
9235351 9235351 PRJNA1159911_P_NODE_21808_length_613_cov_1.585185_g21284_i0 PRJNA1159911 21808 613 1.585185 9.71718405 Dunaliella viridis 140095 Plants Plants 243 3.3600000000000007e-59   NTclustered gi|156144633|gb|EF650641.1| 140095 g21284 i0 86.9 0.810766721044046 229 14 35 1 70 282 58059 58287 Dunaliella viridis strain SHU clone BAC 73E09 hypothetical protein, sodium-dependent phosphate transporter (SPT1), hypothetical protein, sodium-dependent phosphate transporter (SPT1-2), and hypothetical proteins genes, complete cds blastn 497 243 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella viridis
11787464 11787464 PRJNA1159911_P_NODE_94310_length_246_cov_0.890173_g93768_i0 PRJNA1159911 94310 246 0.890173 2.18982558 Dunaliella viridis 140095 Plants Plants 411 3.1799999999999995e-110   NTclustered gi|156144633|gb|EF650641.1| 140095 g93768 i0 96.748 2.03252032520325 246 8 100 0 1 246 30382 30627 Dunaliella viridis strain SHU clone BAC 73E09 hypothetical protein, sodium-dependent phosphate transporter (SPT1), hypothetical protein, sodium-dependent phosphate transporter (SPT1-2), and hypothetical proteins genes, complete cds blastn 500 411 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella viridis
13061170 13061170 PRJNA1159911_P_NODE_27911_length_516_cov_10.873589_g27371_i0 PRJNA1159911 27911 516 10.873589 56.10771924 Johnson-sea-linkia profunda 575876 Plants Plants 741 0   NTclustered gi|1482675168|gb|MH591089.1| 575876 g27371 i0 92.664 73.1802325581395 518 33 100 4 1 516 20448 19934 Johnson-sea-linkia profunda chloroplast blastn 37761 741 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Halimedaceae Johnson-sea-linkia Johnson-sea-linkia profunda
13061918 13061918 PRJNA1159911_P_NODE_67351_length_290_cov_1.373272_g66809_i0 PRJNA1159911 67351 290 1.373272 3.9824888 Dunaliella viridis 140095 Plants Plants 462 1.05e-125   NTclustered gi|961349990|gb|KT266558.1| 140095 g66809 i0 95.254 1.01724137931034 295 9 100 2 1 290 143 437 Dunaliella viridis cadmium resistance protein 2 (CRP2) mRNA, complete cds blastn 295 462 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella viridis
15611702 15611702 PRJNA1159911_P_NODE_99773_length_242_cov_0.911243_g99231_i0 PRJNA1159911 99773 242 0.911243 2.20520806 Dunaliella viridis 140095 Plants Plants 377 3.17e-100   NTclustered gi|156144633|gb|EF650641.1| 140095 g99231 i0 97.738 3.42561983471074 221 2 90 3 25 242 28765 28985 Dunaliella viridis strain SHU clone BAC 73E09 hypothetical protein, sodium-dependent phosphate transporter (SPT1), hypothetical protein, sodium-dependent phosphate transporter (SPT1-2), and hypothetical proteins genes, complete cds blastn 829 377 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella viridis
18160529 18160529 PRJNA1159911_P_NODE_97195_length_244_cov_0.877193_g96653_i0 PRJNA1159911 97195 244 0.877193 2.14035092 Dunaliella sp. MBTD-CMFRI-S122 1147749 Plants Plants 440 4.019999999999999e-119   NTclustered gi|377774218|gb|JN797799.1| 1147749 g96653 i0 99.18 92.5081967213115 244 2 100 0 1 244 648 405 Dunaliella sp. MBTD-CMFRI-S122 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 22572 440 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella sp. MBTD-CMFRI-S122
20710282 20710282 PRJNA1159911_P_NODE_98137_length_243_cov_0.905882_g97595_i0 PRJNA1159911 98137 243 0.905882 2.20129326 Tetraselmis sp. RG-15 65602 Plants Plants 130 9.84e-26   NTclustered gi|2407313|gb|AF017998.1|AF017998 65602 g97595 i0 83.448 23.4485596707819 145 19 58 3 103 243 1069 1212 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds blastn 5698 130 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Tetraselmis Tetraselmis sp. RG-15
21985521 21985521 PRJNA1159911_P_NODE_91618_length_248_cov_0.880000_g91076_i0 PRJNA1159911 91618 248 0.88 2.1824 Dunaliella viridis 140095 Plants Plants 113 1.01e-20   NTclustered gi|212292625|gb|FJ386538.1| 140095 g91076 i0 81.208 1.35483870967742 149 21 59 5 1 146 405 261 Dunaliella viridis strain SHU clone BAC 91A05 RPN10 (RPN10) and hypothetical proteins genes, complete cds blastn 336 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella viridis
23260788 23260788 PRJNA1159911_P_NODE_83859_length_256_cov_1.322404_g83317_i0 PRJNA1159911 83859 256 1.322404 3.38535424 Chlamydomonas reinhardtii 3055 Plants Plants 339 1.5999999999999998e-88   NTclustered gi|2082243702|ref|XM_043061450.1| 3055 g83317 i0 91.532 91.0625 248 17 96 4 3 248 709 954 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_03g204250v5), mRNA blastn 23312 339 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24534385 24534385 PRJNA1159911_P_NODE_71980_length_279_cov_1.456311_g71438_i0 PRJNA1159911 71980 279 1.456311 4.06310769 Dunaliella viridis 140095 Plants Plants 60.2 1.54e-4   NTclustered gi|156144633|gb|EF650641.1| 140095 g71438 i0 97.143 0.125448028673835 35 1 13 0 13 47 46899 46865 Dunaliella viridis strain SHU clone BAC 73E09 hypothetical protein, sodium-dependent phosphate transporter (SPT1), hypothetical protein, sodium-dependent phosphate transporter (SPT1-2), and hypothetical proteins genes, complete cds blastn 35 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;