RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1158727" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1158727 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6681104 6681104 PRJNA1158727_P_NODE_107866_length_282_cov_1.473684_g100405_i0 PRJNA1158727 107866 282 1.473684 4.15578888 Pleistophora mulleri 249366 Fungi Fungi 239 1.86e-58   NTclustered gi|134147422|gb|EF119339.1| 249366 g100405 i0 95.918 16.5106382978723 147 6 52 0 2 148 2986 2840 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 4656 239 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
9231641 9231641 PRJNA1158727_P_NODE_125768_length_261_cov_1.228723_g118307_i0 PRJNA1158727 125768 261 1.228723 3.20696703 Ovipleistophora diplostomuri 2023159 Fungi Fungi 361 3.48e-95   NTclustered gi|2017842943|gb|MW811107.1| 2023159 g118307 i0 91.667 15.2068965517241 264 16 99 6 1 260 1444 1183 Ovipleistophora diplostomuri isolate 15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3969 361 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Ovipleistophora Ovipleistophora diplostomuri
23255821 23255821 PRJNA1158727_P_NODE_123039_length_264_cov_1.209424_g115578_i0 PRJNA1158727 123039 264 1.209424 3.19287936 Pleistophora mulleri 249366 Fungi Fungi 287 6.07e-73   NTclustered gi|134147422|gb|EF119339.1| 249366 g115578 i0 86.873 24.5037878787879 259 30 97 3 7 263 2256 2512 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 6469 287 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
23256644 23256644 PRJNA1158727_P_NODE_163799_length_241_cov_0.916667_g156337_i0 PRJNA1158727 163799 241 0.916667 2.20916747 Nematocida parisii 586133 Fungi Fungi 52.8 0.022   NTclustered gi|906373349|ref|XM_013203778.1| 881290 g156337 i0 100 0.116182572614108 28 0 12 0 149 176 530 503 Nematocida parisii ERTm1 uncharacterized protein (NEPG_01404), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida parisii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;