contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA1158727" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1578297 | 1578297 | PRJNA1158727_P_NODE_127462_length_259_cov_1.290323_g120001_i0 | PRJNA1158727 | 127462 | 259 | 1.290323 | 3.34193657 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 276 | 1.29e-69 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g120001 | i0 | 86.154 | 82.976833976834 | 260 | 31 | 99 | 4 | 3 | 259 | 423454 | 423711 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 21491 | 276 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 4130810 | 4130810 | PRJNA1158727_P_NODE_138244_length_250_cov_0.870056_g130782_i0 | PRJNA1158727 | 138244 | 250 | 0.870056 | 2.17514 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 270 | 5.74e-68 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g130782 | i0 | 89.352 | 7.464 | 216 | 22 | 86 | 1 | 9 | 223 | 4469478 | 4469263 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 1866 | 270 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 6683271 | 6683271 | PRJNA1158727_P_NODE_43366_length_572_cov_2.370741_g35948_i0 | PRJNA1158727 | 43366 | 572 | 2.370741 | 13.56063852 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 789 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g35948 | i0 | 92.883 | 390.622377622378 | 548 | 32 | 95 | 6 | 1 | 543 | 3043515 | 3042970 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 223436 | 789 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 11781967 | 11781967 | PRJNA1158727_P_NODE_110470_length_279_cov_1.160194_g103009_i0 | PRJNA1158727 | 110470 | 279 | 1.160194 | 3.23694126 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 60.2 | 1.54e-4 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g103009 | i0 | 75 | 0.974910394265233 | 136 | 30 | 48 | 4 | 26 | 159 | 1476724 | 1476591 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 272 | 60.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 12516465 | 12516465 | PRJNA1158727_P_NODE_74790_length_356_cov_1.703180_g67329_i0 | PRJNA1158727 | 74790 | 356 | 1.70318 | 6.0633208 | Gemmatirosa | 1706036 | Bacteria | Bacteria | 617 | 2.65e-172 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g67329 | i0 | 98.028 | 209.443820224719 | 355 | 7 | 99 | 0 | 2 | 356 | 423413 | 423059 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 74562 | 617 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 14334296 | 14334296 | PRJNA1158727_P_NODE_42652_length_581_cov_3.850394_g35243_i0 | PRJNA1158727 | 42652 | 581 | 3.850394 | 22.37078914 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 616 | 1.6199999999999996e-171 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g35243 | i0 | 85.959 | 170.734939759036 | 584 | 73 | 99 | 9 | 1 | 579 | 2076556 | 2075977 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 99197 | 616 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 15607060 | 15607060 | PRJNA1158727_P_NODE_155053_length_244_cov_0.900585_g147591_i0 | PRJNA1158727 | 155053 | 244 | 0.900585 | 2.1974274 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 220 | 5.699999999999998e-53 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g147591 | i0 | 84.211 | 2.62295081967213 | 228 | 34 | 93 | 2 | 4 | 230 | 2786647 | 2786873 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 640 | 220 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 18156178 | 18156178 | PRJNA1158727_P_NODE_163735_length_241_cov_0.916667_g156273_i0 | PRJNA1158727 | 163735 | 241 | 0.916667 | 2.20916747 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 204 | 5.66e-48 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g156273 | i0 | 82.278 | 2.39419087136929 | 237 | 40 | 98 | 2 | 1 | 236 | 3164834 | 3164599 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 577 | 204 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 18889346 | 18889346 | PRJNA1158727_P_NODE_90375_length_312_cov_1.933054_g82914_i0 | PRJNA1158727 | 90375 | 312 | 1.933054 | 6.03112848 | Gemmatimonadaceae | 219687 | Bacteria | Bacteria | 315 | 3.37e-81 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g82914 | i0 | 84.936 | 68.8269230769231 | 312 | 45 | 99 | 2 | 2 | 312 | 402928 | 402618 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 21474 | 318 | 0.990566037735849 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 20705015 | 20705015 | PRJNA1158727_P_NODE_126397_length_260_cov_1.550802_g118936_i0 | PRJNA1158727 | 126397 | 260 | 1.550802 | 4.0320852 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 274 | 4.65e-69 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g118936 | i0 | 88.312 | 39.6038461538462 | 231 | 23 | 88 | 4 | 32 | 260 | 3114114 | 3113886 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 10297 | 274 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 20705472 | 20705472 | PRJNA1158727_P_NODE_147477_length_246_cov_3.381503_g140015_i0 | PRJNA1158727 | 147477 | 246 | 3.381503 | 8.31849738 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 226 | 1.2399999999999997e-54 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g140015 | i0 | 83.75 | 47.7235772357724 | 240 | 37 | 98 | 2 | 3 | 242 | 231522 | 231285 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 11740 | 226 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 24530013 | 24530013 | PRJNA1158727_P_NODE_144140_length_248_cov_0.880000_g136678_i0 | PRJNA1158727 | 144140 | 248 | 0.88 | 2.1824 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 283 | 7.309999999999999e-72 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g136678 | i0 | 88.235 | 3.43951612903226 | 238 | 26 | 96 | 2 | 2 | 238 | 4561924 | 4562160 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 853 | 283 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;