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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1158727" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1158727 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1580172 1580172 PRJNA1158727_P_NODE_46622_length_533_cov_4.036957_g39176_i0 PRJNA1158727 46622 533 4.036957 21.51698081 Ripella sp. 805 1217113 Discosea other_Eukaryota 815 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g39176 i0 94.393 101.15947467167 535 23 100 7 1 533 14 543 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 53918 815 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
3588239 3588239 PRJNA1158727_P_NODE_77403_length_347_cov_3.817518_g69942_i0 PRJNA1158727 77403 347 3.817518 13.24678746 Vannellidae 95227 Discosea other_Eukaryota 577 4.3799999999999985e-160   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g69942 i0 96.821 100.190201729107 346 10 99 1 2 347 1679 1335 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 34766 579 0.996545768566494 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
5408974 5408974 PRJNA1158727_P_NODE_59385_length_429_cov_1.721910_g51924_i0 PRJNA1158727 59385 429 1.72191 7.3869939 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 224 8.289999999999998e-54   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g51924 i0 80.201 65.5990675990676 298 59 69 0 1 298 418 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 28142 224 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6681669 6681669 PRJNA1158727_P_NODE_132726_length_253_cov_1.677778_g125265_i0 PRJNA1158727 132726 253 1.677778 4.24477834 Stenamoeba aeronauta 2971262 Discosea other_Eukaryota 403 5.499999999999998e-108   NTclustered gi|2283789716|gb|OP179856.1| 2971262 g125265 i0 95.331 76.2806324110672 257 7 100 5 1 253 391 136 Stenamoeba aeronauta strain Stenaero small subunit ribosomal RNA gene, partial sequence blastn 19299 403 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba aeronauta
6683225 6683225 PRJNA1158727_P_NODE_41866_length_592_cov_1.495183_g34462_i0 PRJNA1158727 41866 592 1.495183 8.85148336 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 483 1.7499999999999999e-131   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g34462 i0 81.802 89.3361486486486 577 103 97 2 17 592 1839 1264 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 52887 483 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6684722 6684722 PRJNA1158727_P_NODE_94066_length_305_cov_0.995690_g86605_i0 PRJNA1158727 94066 305 0.99569 3.0368545 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 102 2.78e-17   NTclustered gi|470459156|ref|XM_004341277.1| 1257118 g86605 i0 92.857 2.89508196721311 70 5 23 0 1 70 1097 1166 Acanthamoeba castellanii str. Neff ribosomal protein L3, putative (ACA1_264110), partial mRNA blastn 883 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9232408 9232408 PRJNA1158727_P_NODE_164788_length_238_cov_2.478788_g157326_i0 PRJNA1158727 164788 238 2.478788 5.89951544 Ripella sp. PS2 1217116 Discosea other_Eukaryota 176 1.22e-39   NTclustered gi|399764205|gb|JQ271716.1| 1217116 g157326 i0 83.59 82.0168067226891 195 25 80 7 48 238 1376 1185 Ripella sp. PS2 18S ribosomal RNA gene, partial sequence blastn 19520 176 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. PS2
21982138 21982138 PRJNA1158727_P_NODE_39738_length_622_cov_4.289617_g32355_i0 PRJNA1158727 39738 622 4.289617 26.68141774 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 455 4.02e-123   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g32355 i0 80.56 60.2958199356913 607 105 97 9 21 622 2520 1922 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 37504 455 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;