contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1158727" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7415286 | 7415286 | PRJNA1158727_P_NODE_114406_length_274_cov_1.348259_g106945_i0 | PRJNA1158727 | 114406 | 274 | 1.348259 | 3.69422966 | Thermus | 270 | Bacteria | Bacteria | 507 | 4.47e-139 | NTclustered | gi|1519238714|emb|LR027517.1| | 274 | g106945 | i0 | 100 | 45.3029197080292 | 274 | 0 | 100 | 0 | 1 | 274 | 156859 | 157132 | Thermus thermophilus isolate TTHNAR1 genome assembly, chromosome: 1 | blastn | 12413 | 507 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 7415728 | 7415728 | PRJNA1158727_P_NODE_91426_length_310_cov_2.493671_g83965_i0 | PRJNA1158727 | 91426 | 310 | 2.493671 | 7.7303801 | Deinococcus | 1298 | Bacteria | Bacteria | 228 | 4.4799999999999984e-55 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g83965 | i0 | 94 | 2.91612903225806 | 150 | 9 | 48 | 0 | 1 | 150 | 811451 | 811302 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 904 | 228 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 7957002 | 7957002 | PRJNA1158727_P_NODE_135447_length_251_cov_0.865169_g127985_i0 | PRJNA1158727 | 135447 | 251 | 0.865169 | 2.17157419 | Allomeiothermus silvanus | 52022 | Bacteria | Bacteria | 449 | 6.899999999999999e-122 | NTclustered | gi|296848933|gb|CP002042.1| | 526227 | g127985 | i0 | 99.197 | 0.99203187250996006 | 249 | 2 | 99 | 0 | 3 | 251 | 2132684 | 2132436 | Meiothermus silvanus DSM 9946, complete genome | blastn | 249 | 449 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Allomeiothermus | Allomeiothermus silvanus | ||
| 7957034 | 7957034 | PRJNA1158727_P_NODE_137027_length_250_cov_1.740113_g129565_i0 | PRJNA1158727 | 137027 | 250 | 1.740113 | 4.3502825 | Deinococcus radiophilus | 32062 | Bacteria | Bacteria | 294 | 3.41e-75 | NTclustered | gi|2152123021|gb|CP086380.1| | 32062 | g129565 | i0 | 91.244 | 5.028 | 217 | 17 | 86 | 2 | 35 | 250 | 601343 | 601128 | Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome | blastn | 1257 | 294 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiophilus | ||
| 15607255 | 15607255 | PRJNA1158727_P_NODE_165893_length_233_cov_2.337500_g158431_i0 | PRJNA1158727 | 165893 | 233 | 2.3375 | 5.446375 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 425 | 1.07e-114 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g158431 | i0 | 99.571 | 14.0085836909871 | 233 | 1 | 100 | 0 | 1 | 233 | 2705114 | 2704882 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 3264 | 425 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 17615509 | 17615509 | PRJNA1158727_P_NODE_82234_length_333_cov_1.280769_g74773_i0 | PRJNA1158727 | 82234 | 333 | 1.280769 | 4.26496077 | Deinococcus | 1298 | Bacteria | Bacteria | 604 | 1.9199999999999991e-168 | NTclustered | gi|1514756464|dbj|LC433574.1| | 47478 | g74773 | i0 | 99.401 | 104.291291291291 | 334 | 1 | 100 | 1 | 1 | 333 | 464 | 797 | Deinococcus sp. TM138 gene for 16S ribosomal RNA, partial sequence | blastn | 34729 | 604 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 19430228 | 19430228 | PRJNA1158727_P_NODE_151836_length_245_cov_0.895349_g144374_i0 | PRJNA1158727 | 151836 | 245 | 0.895349 | 2.19360505 | Deinococcus geothermalis | 68909 | Bacteria | Bacteria | 442 | 1.1199999999999994e-119 | NTclustered | gi|110746139|gb|CP000358.2| | 319795 | g144374 | i0 | 99.184 | 80.5020408163265 | 245 | 2 | 100 | 0 | 1 | 245 | 89516 | 89272 | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence | blastn | 19723 | 442 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 21439752 | 21439752 | PRJNA1158727_P_NODE_97677_length_297_cov_1.843750_g90216_i0 | PRJNA1158727 | 97677 | 297 | 1.84375 | 5.4759375 | Deinococcus | 1298 | Bacteria | Bacteria | 494 | 3.81e-135 | NTclustered | gi|470486828|ref|NR_076782.1| | 502394 | g90216 | i0 | 96.633 | 201.367003367003 | 297 | 10 | 100 | 0 | 1 | 297 | 618 | 914 | Deinococcus gobiensis strain I-0 23S ribosomal RNA gene, complete sequence | blastn | 59806 | 494 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus gobiensis | ||
| 22714575 | 22714575 | PRJNA1158727_P_NODE_35578_length_691_cov_1.444984_g28307_i0 | PRJNA1158727 | 35578 | 691 | 1.444984 | 9.98483944 | Deinococcus | 1298 | Bacteria | Bacteria | 1271 | 0 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g28307 | i0 | 99.855 | 297.215629522431 | 691 | 1 | 100 | 0 | 1 | 691 | 1780 | 1090 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 205376 | 1271 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 24529619 | 24529619 | PRJNA1158727_P_NODE_125000_length_261_cov_3.377660_g117539_i0 | PRJNA1158727 | 125000 | 261 | 3.37766 | 8.8156926 | Fretibacterium fastidiosum | 651822 | Bacteria | Bacteria | 460 | 3.3399999999999995e-125 | NTclustered | gi|2869663113|emb|OZ209244.1| | 651822 | g117539 | i0 | 98.467 | 59.3065134099617 | 261 | 4 | 100 | 0 | 1 | 261 | 68661 | 68401 | Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 | blastn | 15479 | 460 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Aminobacteriaceae | Fretibacterium | Fretibacterium fastidiosum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;