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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1158727" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA1158727 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7957580 7957580 PRJNA1158727_P_NODE_165387_length_235_cov_2.716049_g157925_i0 PRJNA1158727 165387 235 2.716049 6.38271515 Haloarcula sp. CBA1115 1592728 Archaea Archaea 313 8.75e-81   NTclustered gi|749699433|gb|CP010529.1| 1592728 g157925 i0 90.678 10.936170212766 236 20 100 2 1 235 593735 593501 Haloarcula sp. CBA1115, complete genome blastn 2570 313 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula sp. CBA1115
10509448 10509448 PRJNA1158727_P_NODE_52729_length_477_cov_1.009901_g45271_i0 PRJNA1158727 52729 477 1.009901 4.81722777 Halomicrobium urmianum 1586233 Archaea Archaea 52.8 0.046   NTclustered gi|2105355784|gb|CP084090.1| 1586233 g45271 i0 100 0.0587002096436059 28 0 6 0 74 101 281229 281256 Halomicrobium urmianum strain IBRC-M: 10911 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium urmianum
11240762 11240762 PRJNA1158727_P_NODE_126369_length_260_cov_1.604278_g118908_i0 PRJNA1158727 126369 260 1.604278 4.1711228 Halobacteriales 2235 Archaea Archaea 442 1.1999999999999999e-119   NTclustered gi|1646146345|gb|CP039134.1| 272569 g118908 i0 97.308 8.45384615384615 260 7 100 0 1 260 28949 29208 Haloarcula marismortui ATCC 43049 plasmid pHMA155, complete sequence blastn 2198 442 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula marismortui
14332834 14332834 PRJNA1158727_P_NODE_136132_length_251_cov_0.865169_g128670_i0 PRJNA1158727 136132 251 0.865169 2.17157419 Halorubrum sp. CBA1229 1853699 Archaea Archaea 342 1.21e-89   NTclustered gi|1861358827|gb|CP054585.1| 1853699 g128670 i0 91.235 10.5258964143426 251 22 100 0 1 251 3005049 3005299 Halorubrum sp. CBA1229 chromosome, complete genome blastn 2642 342 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. CBA1229

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;