RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1156092" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1156092 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6680503 6680503 PRJNA1156092_P_NODE_13606_length_312_cov_1.271967_g13476_i0 PRJNA1156092 13606 312 1.271967 3.96853704 Periplaneta americana dicistro-like virus 3032225 Viruses Viruses 412 1.1599999999999999e-110   NTclustered gi|2754804027|tpg|BK063169.1| 3032225 g13476 i0 90.764 1.00641025641026 314 22 100 6 1 312 4593 4285 TPA_asm: Periplaneta americana dicistro-like virus hypothetical protein gene, partial cds blastn 314 412 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Periplaneta americana dicistro-like virus
21439168 21439168 PRJNA1156092_P_NODE_32057_length_241_cov_0.916667_g31927_i0 PRJNA1156092 32057 241 0.916667 2.20916747 Viruses 10239 Viruses Viruses 115 2.73e-21   NTclustered gi|2461860523|dbj|LC726803.1| 1046403 g31927 i0 98.485 26.1203319502075 66 0 27 1 177 241 1143 1078 Brassica yellows virus DN134266_c8_g2_i1 gene for CP readthrough protein blastn 6295 115 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Polerovirus Polerovirus TUYV
23255273 23255273 PRJNA1156092_P_NODE_7499_length_393_cov_1.893750_g7369_i0 PRJNA1156092 7499 393 1.89375 7.4424375 Betacoronavirus pandemicum 3418604 Viruses Viruses 108 7.91e-19   NTclustered gi|2165834316|emb|OV196022.1| 2697049 g7369 i0 93.243 19.9618320610687 74 4 19 1 1 74 592 520 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7845 108 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;