RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1156092" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1156092 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5405896 5405896 PRJNA1156092_P_NODE_25385_length_248_cov_0.880000_g25255_i0 PRJNA1156092 25385 248 0.88 2.1824 Rhizophagus irregularis 588596 Fungi Fungi 54.7 0.006   NTclustered gi|2749784523|ref|XM_066133944.1| 588596 g25255 i0 100 0.116935483870968 29 0 12 0 128 156 635 607 Rhizophagus irregularis uncharacterized protein (OCT59_024779), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
9230719 9230719 PRJNA1156092_P_NODE_16748_length_286_cov_1.375587_g16618_i0 PRJNA1156092 16748 286 1.375587 3.93417882 Mycotypha africana 64632 Fungi Fungi 200 8.919999999999998e-47   NTclustered gi|2432561609|ref|XM_053077210.1| 64632 g16618 i0 82.479 32.9755244755245 234 35 81 6 55 285 393 163 Mycotypha africana 40S ribosomal protein S16 (BDF20DRAFT_816965), partial mRNA blastn 9431 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;